BLASTX nr result

ID: Coptis24_contig00032021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032021
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301921.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002280063.2| PREDICTED: U-box domain-containing protein 1...   105   5e-21
emb|CBI19855.3| unnamed protein product [Vitis vinifera]              105   5e-21
emb|CAN75366.1| hypothetical protein VITISV_030646 [Vitis vinifera]   104   7e-21
emb|CBI37755.3| unnamed protein product [Vitis vinifera]              103   1e-20

>ref|XP_002301921.1| predicted protein [Populus trichocarpa] gi|222843647|gb|EEE81194.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/96 (59%), Positives = 70/96 (72%)
 Frame = +3

Query: 3   NFALKNLILRWSEKNKFELPKKDSGXXXXXXXXXXXXXXITALVRDLSFSHLDVQREAVR 182
           N+ALKNLIL+W E N FELPKK                 +++LV+DLS S L+VQR AV+
Sbjct: 321 NYALKNLILQWCENNNFELPKKHVPASSDPETSSEHQEKVSSLVKDLSSSQLEVQRRAVK 380

Query: 183 KIRLLSKENPENRVLIAKSGGIHALVQLLSYPESKI 290
           KIR+LSKENPENR+LIA +GGI  +VQLLSYP+SKI
Sbjct: 381 KIRMLSKENPENRILIANNGGIPPIVQLLSYPDSKI 416


>ref|XP_002280063.2| PREDICTED: U-box domain-containing protein 15-like [Vitis vinifera]
          Length = 649

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/97 (55%), Positives = 72/97 (74%)
 Frame = +3

Query: 3   NFALKNLILRWSEKNKFELPKKDSGXXXXXXXXXXXXXXITALVRDLSFSHLDVQREAVR 182
           N+AL+NLIL+W E N F++PKKD+               + ++V++LS + L+VQR+A +
Sbjct: 332 NYALRNLILQWCENNNFQIPKKDASSSTEGSSEQKES--VLSVVQNLSSNQLEVQRKAAK 389

Query: 183 KIRLLSKENPENRVLIAKSGGIHALVQLLSYPESKIQ 293
           KIR+LSKENP NRVLIA+SGGI  LVQLLSYP+SKIQ
Sbjct: 390 KIRMLSKENPVNRVLIAQSGGIPPLVQLLSYPDSKIQ 426


>emb|CBI19855.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/97 (55%), Positives = 72/97 (74%)
 Frame = +3

Query: 3   NFALKNLILRWSEKNKFELPKKDSGXXXXXXXXXXXXXXITALVRDLSFSHLDVQREAVR 182
           N+AL+NLIL+W E N F++PKKD+               + ++V++LS + L+VQR+A +
Sbjct: 332 NYALRNLILQWCENNNFQIPKKDASSSTEGSSEQKES--VLSVVQNLSSNQLEVQRKAAK 389

Query: 183 KIRLLSKENPENRVLIAKSGGIHALVQLLSYPESKIQ 293
           KIR+LSKENP NRVLIA+SGGI  LVQLLSYP+SKIQ
Sbjct: 390 KIRMLSKENPVNRVLIAQSGGIPPLVQLLSYPDSKIQ 426


>emb|CAN75366.1| hypothetical protein VITISV_030646 [Vitis vinifera]
          Length = 1049

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/97 (55%), Positives = 72/97 (74%)
 Frame = +3

Query: 3   NFALKNLILRWSEKNKFELPKKDSGXXXXXXXXXXXXXXITALVRDLSFSHLDVQREAVR 182
           N+AL+NLIL+W E N F++PKKD+               + ++V++LS + L+VQR+A +
Sbjct: 332 NYALRNLILQWCENNNFQIPKKDASSSTEGSSEQKES--VLSVVQNLSSNQLEVQRKAXK 389

Query: 183 KIRLLSKENPENRVLIAKSGGIHALVQLLSYPESKIQ 293
           KIR+LSKENP NRVLIA+SGGI  LVQLLSYP+SKIQ
Sbjct: 390 KIRMLSKENPVNRVLIAQSGGIPPLVQLLSYPDSKIQ 426


>emb|CBI37755.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/97 (55%), Positives = 71/97 (73%)
 Frame = +3

Query: 3   NFALKNLILRWSEKNKFELPKKDSGXXXXXXXXXXXXXXITALVRDLSFSHLDVQREAVR 182
           N+AL+NLIL+W EKN+FELP+KD                I++LV++LS S  DVQR+A+ 
Sbjct: 316 NYALRNLILQWCEKNQFELPRKDI-KAGSNGSSIQVKQKISSLVQNLSSSQPDVQRKAIM 374

Query: 183 KIRLLSKENPENRVLIAKSGGIHALVQLLSYPESKIQ 293
           KIR+L+KENP+NR+ IA  GGI  LVQLLSYP+SK+Q
Sbjct: 375 KIRMLAKENPDNRIRIANRGGIPPLVQLLSYPDSKLQ 411


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