BLASTX nr result

ID: Coptis24_contig00032006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032006
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269840.2| PREDICTED: AP2-like ethylene-responsive tran...   106   2e-21
emb|CBI17594.3| unnamed protein product [Vitis vinifera]              106   2e-21
emb|CAN63760.1| hypothetical protein VITISV_008633 [Vitis vinifera]   106   2e-21
ref|XP_002514802.1| Protein AINTEGUMENTA, putative [Ricinus comm...    96   4e-18
ref|XP_002316179.1| AP2 domain-containing transcription factor [...    89   3e-16

>ref|XP_002269840.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           BBM-like [Vitis vinifera]
          Length = 730

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/93 (59%), Positives = 62/93 (66%), Gaps = 13/93 (13%)
 Frame = -3

Query: 241 MTSMNNWLAFTLSPQELPSHSQNH-------------EISGTDVSNDCFDLASNSTDPSL 101
           M SMNNWL F+LSP+ELP   +NH             EISGTDVS +CFDL S+ST PSL
Sbjct: 1   MASMNNWLGFSLSPRELPPQPENHSQNSVSRLGFNSDEISGTDVSGECFDLTSDSTAPSL 60

Query: 100 NLPSMRPDGPFGILEAFNRTHQPHDWNVKDLSM 2
           NLP      PFGILEAFNR +QP DWN+K L M
Sbjct: 61  NLPP-----PFGILEAFNRNNQPQDWNMKGLGM 88


>emb|CBI17594.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/93 (59%), Positives = 62/93 (66%), Gaps = 13/93 (13%)
 Frame = -3

Query: 241 MTSMNNWLAFTLSPQELPSHSQNH-------------EISGTDVSNDCFDLASNSTDPSL 101
           M SMNNWL F+LSP+ELP   +NH             EISGTDVS +CFDL S+ST PSL
Sbjct: 1   MASMNNWLGFSLSPRELPPQPENHSQNSVSRLGFNSDEISGTDVSGECFDLTSDSTAPSL 60

Query: 100 NLPSMRPDGPFGILEAFNRTHQPHDWNVKDLSM 2
           NLP      PFGILEAFNR +QP DWN+K L M
Sbjct: 61  NLPP-----PFGILEAFNRNNQPQDWNMKGLGM 88


>emb|CAN63760.1| hypothetical protein VITISV_008633 [Vitis vinifera]
          Length = 731

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/93 (59%), Positives = 62/93 (66%), Gaps = 13/93 (13%)
 Frame = -3

Query: 241 MTSMNNWLAFTLSPQELPSHSQNH-------------EISGTDVSNDCFDLASNSTDPSL 101
           M SMNNWL F+LSP+ELP   +NH             EISGTDVS +CFDL S+ST PSL
Sbjct: 1   MASMNNWLGFSLSPRELPPQPENHSQNSVSRLGFNSDEISGTDVSGECFDLTSDSTAPSL 60

Query: 100 NLPSMRPDGPFGILEAFNRTHQPHDWNVKDLSM 2
           NLP      PFGILEAFNR +QP DWN+K L M
Sbjct: 61  NLPP-----PFGILEAFNRNNQPQDWNMKGLGM 88


>ref|XP_002514802.1| Protein AINTEGUMENTA, putative [Ricinus communis]
           gi|223545853|gb|EEF47356.1| Protein AINTEGUMENTA,
           putative [Ricinus communis]
          Length = 729

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 53/97 (54%), Positives = 60/97 (61%), Gaps = 17/97 (17%)
 Frame = -3

Query: 241 MTSMNNWLAFTLSPQELPSHSQNH-----------------EISGTDVSNDCFDLASNST 113
           M SMNNWL F+LSP ELPSHS +H                 EI G DVS +CFDL S+ST
Sbjct: 1   MASMNNWLGFSLSPHELPSHSDHHQDHHSQNTASRLGFHSDEIPGADVSGECFDLPSDST 60

Query: 112 DPSLNLPSMRPDGPFGILEAFNRTHQPHDWNVKDLSM 2
            PSLNLP+     PFGILEAF R +Q  DWN+K L M
Sbjct: 61  APSLNLPA-----PFGILEAF-RNNQSQDWNMKGLGM 91


>ref|XP_002316179.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222865219|gb|EEF02350.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 604

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 53/94 (56%), Positives = 60/94 (63%), Gaps = 17/94 (18%)
 Frame = -3

Query: 232 MNNWLAFTLSPQELPS--------HSQN---------HEISGTDVSNDCFDLASNSTDPS 104
           MNNWL F+LS QELPS        HSQN          EISGT+VS +CFDL S+ST PS
Sbjct: 1   MNNWLGFSLSHQELPSSQSDHHQDHSQNTDSRLGFHSDEISGTNVSGECFDLTSDSTAPS 60

Query: 103 LNLPSMRPDGPFGILEAFNRTHQPHDWNVKDLSM 2
           LNLP+      FGILEAF R +QP DWN+K L M
Sbjct: 61  LNLPA-----TFGILEAF-RNNQPQDWNMKSLGM 88


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