BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032001
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   141   5e-32
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic...   138   5e-31
ref|XP_002511689.1| DNA repair and recombination protein radA, p...   136   2e-30
gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]              135   3e-30
gb|AFK34970.1| unknown [Medicago truncatula]                          135   3e-30

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/80 (83%), Positives = 73/80 (91%)
 Frame = -1

Query: 368 VVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWNGSERFAYIDKSPSLRSASAPY 189
           VV LNQVTTK TEGSFQLTLALGDSWSH+CTNRVILYWNG ER+AYIDKSPSLRSASAPY
Sbjct: 267 VVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLRSASAPY 326

Query: 188 SVTSRGIRDSASNCKRIRMM 129
           SVT +GIR + S CKRI++M
Sbjct: 327 SVTGKGIRTATSKCKRIKIM 346


>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|357477663|ref|XP_003609117.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510139|gb|AES91281.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510172|gb|AES91314.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/80 (82%), Positives = 73/80 (91%)
 Frame = -1

Query: 368 VVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWNGSERFAYIDKSPSLRSASAPY 189
           VV LNQVTTK  EGSFQLTLALGDSWSH+CTNR+ILYWNG ER AYIDKSPSL+SASAPY
Sbjct: 268 VVMLNQVTTKHIEGSFQLTLALGDSWSHSCTNRIILYWNGDERHAYIDKSPSLKSASAPY 327

Query: 188 SVTSRGIRDSASNCKRIRMM 129
           SVTSRGIR+S S+ KRI+M+
Sbjct: 328 SVTSRGIRNSTSSSKRIKMV 347


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  136 bits (343), Expect = 2e-30
 Identities = 63/80 (78%), Positives = 74/80 (92%)
 Frame = -1

Query: 368 VVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWNGSERFAYIDKSPSLRSASAPY 189
           VV LNQVTTK TEGSFQL LALG+SWSH+CTNR+ILYWN +ER+AYIDKSPSL+SA+APY
Sbjct: 267 VVLLNQVTTKHTEGSFQLGLALGESWSHSCTNRIILYWNSNERYAYIDKSPSLKSATAPY 326

Query: 188 SVTSRGIRDSASNCKRIRMM 129
           SVT  GIR+S+SNCKR++MM
Sbjct: 327 SVTRGGIRNSSSNCKRVKMM 346


>gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]
          Length = 363

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/80 (80%), Positives = 74/80 (92%)
 Frame = -1

Query: 368 VVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWNGSERFAYIDKSPSLRSASAPY 189
           VV LNQVTTKF+EGSFQL LALGDSWSH+CTNRVILYWNG ER+AYIDKSPSL SASA Y
Sbjct: 284 VVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLPSASASY 343

Query: 188 SVTSRGIRDSASNCKRIRMM 129
           +VTSRG+R+S+S+ KR++MM
Sbjct: 344 TVTSRGLRNSSSSSKRVKMM 363


>gb|AFK34970.1| unknown [Medicago truncatula]
          Length = 269

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/80 (81%), Positives = 72/80 (90%)
 Frame = -1

Query: 368 VVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWNGSERFAYIDKSPSLRSASAPY 189
           VV LNQVTTK  E SFQLTLALGDSWSH+CTNR+ILYWNG ER AYIDKSPSL+SASAPY
Sbjct: 190 VVMLNQVTTKHIESSFQLTLALGDSWSHSCTNRIILYWNGDERHAYIDKSPSLKSASAPY 249

Query: 188 SVTSRGIRDSASNCKRIRMM 129
           SVTSRGIR+S S+ KRI+M+
Sbjct: 250 SVTSRGIRNSTSSSKRIKMV 269