BLASTX nr result

ID: Coptis24_contig00031988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031988
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258...   105   7e-21
ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788...    96   5e-18
ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18
ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211...    89   5e-16
ref|XP_002518522.1| conserved hypothetical protein [Ricinus comm...    87   2e-15

>ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258839 [Vitis vinifera]
           gi|302144074|emb|CBI23179.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  105 bits (262), Expect = 7e-21
 Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
 Frame = +1

Query: 349 KERELEIGYPTEVKHVAHIGWESQCNT-PSWMNDFNTSSNFSTRSLSNLGDEPRDHYNVP 525
           KERE+EIGYPT+VKHVAHIGW+    + PSWMN++ ++ +FS+ SL +   EPRD  N+ 
Sbjct: 22  KEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNEYKSTHDFSSSSLGSF-IEPRDTNNIV 80

Query: 526 V-STWSSQDFEQSMARLPASDNFKESPPNGPP 618
             STWSSQDFEQSM + P S+ FK+ PP   P
Sbjct: 81  ARSTWSSQDFEQSMGQHPVSEMFKDCPPTDVP 112


>ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788423 [Glycine max]
          Length = 186

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = +1

Query: 349 KERELEIGYPTEVKHVAHIGWESQCNT-PSWMNDFNTSSNFSTRSLSNLGDEPRDHYNVP 525
           KERE+EIGYPT+VKHVAHIGW+    T PSWMNDF T+ +FST SL NLG+    +    
Sbjct: 22  KEREMEIGYPTDVKHVAHIGWDGPSGTGPSWMNDFKTAPDFST-SLGNLGELSDPNAMAV 80

Query: 526 VSTWSSQDFEQSMARLPASDNFKESPPNG 612
            ++WSSQDFE S    P S+ +K  P  G
Sbjct: 81  TTSWSSQDFEVSTGSQPTSNIYKGIPSAG 109


>ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|222848568|gb|EEE86115.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = +1

Query: 349 KERELEIGYPTEVKHVAHIGWESQC-NTPSWMNDFNTSSNFSTRSLSNLGDEPRDHYNVP 525
           KERE+EIGYPT+VKHVAHIGW+    + PSWMN+F T  +FST +++N    PRD  +V 
Sbjct: 22  KEREMEIGYPTDVKHVAHIGWDGHSGSAPSWMNEFKTPPDFSTTTVAN----PRDSSSVI 77

Query: 526 VSTWSSQDFEQSMARLPASDNFKESPPNGPP 618
           +S WSSQDF+ S+      + F + PP+  P
Sbjct: 78  LSPWSSQDFDHSLGHQTMPNVFNDIPPSDLP 108


>ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211354 [Cucumis sativus]
           gi|449472647|ref|XP_004153657.1| PREDICTED:
           uncharacterized protein LOC101222050 [Cucumis sativus]
           gi|449526766|ref|XP_004170384.1| PREDICTED:
           uncharacterized LOC101222050 [Cucumis sativus]
          Length = 159

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 9/98 (9%)
 Frame = +1

Query: 349 KERELEIGYPTEVKHVAHIGWESQCNT-PSWMNDFNTS-SNFSTRSLSNLGDEPRDHYNV 522
           KERE+EIGYPT+VKHVAHIGW+    T PSWMN+F T+  +FS  S  ++ D  RD  + 
Sbjct: 22  KEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKTAPEHFSAASFGDISDR-RDSSST 80

Query: 523 PV---STWSSQDFEQSMARLPASDNFKESP----PNGP 615
            V   +TWSS DF+Q+M R   SD F E P    PN P
Sbjct: 81  AVTAPTTWSSLDFDQAMLRQQTSDFFGELPRTEIPNLP 118


>ref|XP_002518522.1| conserved hypothetical protein [Ricinus communis]
           gi|223542367|gb|EEF43909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 46/92 (50%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
 Frame = +1

Query: 349 KERELEIGYPTEVKHVAHIGWESQC-NTPSWMNDFNTSSNFSTRSLSNLGDEPRDHYNVP 525
           KERE+EIGYPT+VKHVAHIGW+    + PSWMNDF T  +FS+ +L+N  D         
Sbjct: 23  KEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNDFKTPPDFSSTTLANTRDSDS---IAN 79

Query: 526 VSTWSSQDFEQSMARLPAS-DNFKESPPNGPP 618
            S WSSQDF+QS+   P S  +F    P+  P
Sbjct: 80  FSPWSSQDFDQSIGSQPMSTKSFSNIVPSSDP 111


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