BLASTX nr result

ID: Coptis24_contig00031982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031982
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524959.1| calcium ion binding protein, putative [Ricin...   150   1e-34
ref|NP_568026.1| uncharacterized protein [Arabidopsis thaliana] ...   148   4e-34
ref|XP_002866948.1| hypothetical protein ARALYDRAFT_490873 [Arab...   147   1e-33
dbj|BAC43648.1| unknown protein [Arabidopsis thaliana] gi|283728...   145   3e-33
ref|XP_002332234.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32

>ref|XP_002524959.1| calcium ion binding protein, putative [Ricinus communis]
           gi|223535794|gb|EEF37456.1| calcium ion binding protein,
           putative [Ricinus communis]
          Length = 167

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/119 (57%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
 Frame = +2

Query: 20  GVPSVQVLNLLTDTVYKQFITKDIKNFDEFHIAMLDIFITFNSALPGMHYDVPQREDVEE 199
           G+PS Q++  +  T+YKQF+ +DIK F+EFHIA+LDIF +FNS+LPG HYDVP R++V+E
Sbjct: 11  GLPSTQMVGFVMGTLYKQFVERDIKTFEEFHIAILDIFSSFNSSLPGKHYDVPSRKNVQE 70

Query: 200 CFRKWQESTAE-QKKKVIEDFMVKFVNLSKLDDYTMITGLVTPPAAMALKRAGENVPQL 373
           CF  W+++ +E ++K++   FM K+V+LSKLDD  M+TG+VTPPAAM  K+A ENVPQL
Sbjct: 71  CFSGWKDAKSEPERKELFIAFMKKYVHLSKLDDSVMVTGVVTPPAAMVAKKAIENVPQL 129


>ref|NP_568026.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332661395|gb|AEE86795.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 161

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/122 (58%), Positives = 92/122 (75%), Gaps = 1/122 (0%)
 Frame = +2

Query: 20  GVPSVQVLNLLTDTVYKQFITKDIKNFDEFHIAMLDIFITFNSALPGMHYDVPQREDVEE 199
           GVP  Q++N++  ++YKQF  K I NFD+FH+A+LDIF  FNSALPG H+D P  + ++ 
Sbjct: 11  GVPPTQMMNMVMGSLYKQFTQKAINNFDDFHVAVLDIFNNFNSALPGRHFDFPTPDQIKV 70

Query: 200 CFRKWQES-TAEQKKKVIEDFMVKFVNLSKLDDYTMITGLVTPPAAMALKRAGENVPQLN 376
           CF +W+E+   E+KKK+  +FM K V  SKLDD TMITG+V+PPAAMA KRAGENVPQL 
Sbjct: 71  CFARWKEAKDEEEKKKLFIEFMSKSVKPSKLDDVTMITGIVSPPAAMAAKRAGENVPQLK 130

Query: 377 KI 382
            I
Sbjct: 131 LI 132


>ref|XP_002866948.1| hypothetical protein ARALYDRAFT_490873 [Arabidopsis lyrata subsp.
           lyrata] gi|297312784|gb|EFH43207.1| hypothetical protein
           ARALYDRAFT_490873 [Arabidopsis lyrata subsp. lyrata]
          Length = 161

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/122 (57%), Positives = 92/122 (75%), Gaps = 1/122 (0%)
 Frame = +2

Query: 20  GVPSVQVLNLLTDTVYKQFITKDIKNFDEFHIAMLDIFITFNSALPGMHYDVPQREDVEE 199
           GVP  Q++N++  ++YKQF  K I +FD+FH+A+LDIF  FNSALPG H+D P  + ++ 
Sbjct: 11  GVPPTQMMNMVMGSLYKQFTQKAINSFDDFHVAVLDIFNNFNSALPGRHFDFPTPDQIKA 70

Query: 200 CFRKWQES-TAEQKKKVIEDFMVKFVNLSKLDDYTMITGLVTPPAAMALKRAGENVPQLN 376
           CF +W+E+   E+KKK+  +FM K V  SKLDD TMITG+V+PPAAMA KRAGENVPQL 
Sbjct: 71  CFARWKEAKDEEEKKKLFIEFMSKSVKPSKLDDVTMITGIVSPPAAMAAKRAGENVPQLK 130

Query: 377 KI 382
            I
Sbjct: 131 LI 132


>dbj|BAC43648.1| unknown protein [Arabidopsis thaliana] gi|28372878|gb|AAO39921.1|
           At4g37445 [Arabidopsis thaliana]
          Length = 161

 Score =  145 bits (366), Expect = 3e-33
 Identities = 70/122 (57%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
 Frame = +2

Query: 20  GVPSVQVLNLLTDTVYKQFITKDIKNFDEFHIAMLDIFITFNSALPGMHYDVPQREDVEE 199
           GVP  Q++N++  ++YKQF  K I NFD+FH+A+LDIF  FNSALPG H+D P  + ++ 
Sbjct: 11  GVPPTQMMNMVMGSLYKQFTQKAINNFDDFHVAVLDIFNNFNSALPGRHFDFPTPDQIKV 70

Query: 200 CFRKWQES-TAEQKKKVIEDFMVKFVNLSKLDDYTMITGLVTPPAAMALKRAGENVPQLN 376
           CF +W+E+   E+KKK+  +FM K V  SKLDD TMITG+V+PPAAMA KRAGENV QL 
Sbjct: 71  CFARWKEAKDEEEKKKLFIEFMSKSVKPSKLDDVTMITGIVSPPAAMAAKRAGENVSQLK 130

Query: 377 KI 382
            I
Sbjct: 131 LI 132


>ref|XP_002332234.1| predicted protein [Populus trichocarpa] gi|222831847|gb|EEE70324.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/120 (55%), Positives = 89/120 (74%)
 Frame = +2

Query: 23  VPSVQVLNLLTDTVYKQFITKDIKNFDEFHIAMLDIFITFNSALPGMHYDVPQREDVEEC 202
           +PS Q+ + +  ++YKQF+ K+IK FDEFH+A+L+IF TFNS+LPG HYDVP R+DVE  
Sbjct: 14  IPSTQMPSYVMGSLYKQFVDKNIKTFDEFHVAVLEIFNTFNSSLPGKHYDVPSRKDVEAG 73

Query: 203 FRKWQESTAEQKKKVIEDFMVKFVNLSKLDDYTMITGLVTPPAAMALKRAGENVPQLNKI 382
           +  W+ +   +KK++  +FM + +N  KLDD T I GL TPPAAMA KRAGENVPQL  I
Sbjct: 74  YNDWRAAPELEKKEMFINFMKEKLNTGKLDDSTFIIGLATPPAAMAAKRAGENVPQLGFI 133


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