BLASTX nr result

ID: Coptis24_contig00031978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031978
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317125.1| predicted protein [Populus trichocarpa] gi|2...   334   1e-89
ref|XP_002331541.1| predicted protein [Populus trichocarpa] gi|2...   324   1e-86
ref|XP_002269660.1| PREDICTED: mitogen-activated protein kinase ...   314   1e-83
emb|CAN65217.1| hypothetical protein VITISV_024689 [Vitis vinifera]   311   1e-82
ref|XP_002518446.1| ATP binding protein, putative [Ricinus commu...   307   1e-81

>ref|XP_002317125.1| predicted protein [Populus trichocarpa] gi|222860190|gb|EEE97737.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  334 bits (856), Expect = 1e-89
 Identities = 159/241 (65%), Positives = 193/241 (80%), Gaps = 5/241 (2%)
 Frame = -2

Query: 713 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGF 534
           MDWTRG +IGHG+SATVS+ KA+RS +VFAVKS EL KS+ LQREQ ILS+++CPQIV +
Sbjct: 1   MDWTRGRTIGHGSSATVSMAKANRSGQVFAVKSAELLKSESLQREQSILSTLKCPQIVVY 60

Query: 533 LGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDILHGLDYLHMNQ 354
            GCD+TNE+G   YNLF+EY+SGG L D+I+  GGCLDE  IR + R IL GL+YLH N 
Sbjct: 61  KGCDITNENGKLFYNLFLEYISGGTLIDAIREGGGCLDEAMIRLYARTILLGLEYLHCNG 120

Query: 353 IVHCDIKGKNVLIGSDGAKIADLGCSKWVNEFE-----VSANPIAGTPVFMAPEVASGEE 189
           IVHCDIKG N+L+  DGAKIADLGC+K V+E        +  PIAGTP++MAPEVA GE 
Sbjct: 121 IVHCDIKGHNILVTGDGAKIADLGCAKRVDEVSGGTALKTTAPIAGTPLYMAPEVARGEH 180

Query: 188 QSFPADIWALGCTVIEMATGSPPWKDAKDPVSALYRIAFSGDVPEVPSFLSEQAKDFLEK 9
           Q FPADIW++GCTV+EMATG  PW +  DPVSALY+I FSG+VPE+PSF+S+QAKDFL K
Sbjct: 181 QGFPADIWSVGCTVVEMATGQAPWVNVSDPVSALYQIGFSGNVPEIPSFMSKQAKDFLSK 240

Query: 8   C 6
           C
Sbjct: 241 C 241


>ref|XP_002331541.1| predicted protein [Populus trichocarpa] gi|222873765|gb|EEF10896.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  324 bits (830), Expect = 1e-86
 Identities = 153/240 (63%), Positives = 191/240 (79%), Gaps = 4/240 (1%)
 Frame = -2

Query: 713 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGF 534
           MDWTRG +IG G+SATVS+ +A++S +VFAVKS ELSKS+ LQ+EQ +LS++RCPQIV +
Sbjct: 1   MDWTRGQTIGRGSSATVSMARANQSGKVFAVKSAELSKSESLQKEQIVLSTLRCPQIVAY 60

Query: 533 LGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDILHGLDYLHMNQ 354
            GCD+TNE+G  +YNLF+EY SGG L D+I+  GGCLDE  IR + R IL GL+YLH N 
Sbjct: 61  KGCDITNENGKVLYNLFLEYASGGTLIDAIREGGGCLDEDMIRLYARTILLGLEYLHCNG 120

Query: 353 IVHCDIKGKNVLIGSDGAKIADLGCSKWVNEFEV----SANPIAGTPVFMAPEVASGEEQ 186
           IVHCDIKG N+L+ SDGAKIADLGC+K V+E       +   IAGTP++MAPEVA  E Q
Sbjct: 121 IVHCDIKGHNILVTSDGAKIADLGCAKRVDEVSEADWGTTTTIAGTPLYMAPEVARAEHQ 180

Query: 185 SFPADIWALGCTVIEMATGSPPWKDAKDPVSALYRIAFSGDVPEVPSFLSEQAKDFLEKC 6
            FPADIWA+GCT++EMATG  PW +  DPVSALY+I FSG+ PE+PSF+S+QA+DFL KC
Sbjct: 181 GFPADIWAVGCTIVEMATGQAPWVNVSDPVSALYQIGFSGNAPEIPSFMSKQARDFLSKC 240


>ref|XP_002269660.1| PREDICTED: mitogen-activated protein kinase kinase kinase A [Vitis
           vinifera] gi|297739169|emb|CBI28820.3| unnamed protein
           product [Vitis vinifera]
          Length = 420

 Score =  314 bits (804), Expect = 1e-83
 Identities = 148/236 (62%), Positives = 184/236 (77%)
 Frame = -2

Query: 713 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGF 534
           MDWTRGH++G G+SATVS+  + RS +VFAVKSVELS+S+ LQRE+RILSS+R P IVG+
Sbjct: 1   MDWTRGHTLGSGSSATVSLANSLRSGDVFAVKSVELSRSESLQREERILSSLRSPYIVGY 60

Query: 533 LGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDILHGLDYLHMNQ 354
            GCD+T E+   MYNLF+EY+ GG L D+I+  GG L E  I  + R I+ GLDY+H   
Sbjct: 61  KGCDITRENKKLMYNLFIEYMPGGTLGDAIRRGGGQLHESMIGIYARQIVQGLDYIHSRG 120

Query: 353 IVHCDIKGKNVLIGSDGAKIADLGCSKWVNEFEVSANPIAGTPVFMAPEVASGEEQSFPA 174
           +VHCDIKG+NVLIG DGAKIAD GC+KW N  +    PIAGTP FMAPEVA GE+Q +P+
Sbjct: 121 LVHCDIKGQNVLIGEDGAKIADFGCAKWTNGKDDRKVPIAGTPFFMAPEVARGEDQGYPS 180

Query: 173 DIWALGCTVIEMATGSPPWKDAKDPVSALYRIAFSGDVPEVPSFLSEQAKDFLEKC 6
           D+WALGCT+IEMATG  PW +  + V+ALYRI FS ++P +PSFLS+QAKDFL KC
Sbjct: 181 DVWALGCTIIEMATGGAPWPNVANAVAALYRIGFSEELPWIPSFLSDQAKDFLSKC 236


>emb|CAN65217.1| hypothetical protein VITISV_024689 [Vitis vinifera]
          Length = 420

 Score =  311 bits (796), Expect = 1e-82
 Identities = 147/236 (62%), Positives = 183/236 (77%)
 Frame = -2

Query: 713 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGF 534
           MDWTRGH++G G+SATVS+  + RS +VFAVKSVELS+S+ LQRE+RILSS+R P IVG+
Sbjct: 1   MDWTRGHTLGSGSSATVSLANSLRSGDVFAVKSVELSRSESLQREERILSSLRSPYIVGY 60

Query: 533 LGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDILHGLDYLHMNQ 354
            GCD+T E+   MYNLF+EY+ GG L D+I+  GG L E  I  + R I+ GLDY+H   
Sbjct: 61  KGCDITRENKKLMYNLFIEYMPGGTLGDAIRRGGGQLHESMIGIYARQIVQGLDYIHSRG 120

Query: 353 IVHCDIKGKNVLIGSDGAKIADLGCSKWVNEFEVSANPIAGTPVFMAPEVASGEEQSFPA 174
           +VHCDIKG+NVLIG DGAKIAD GC+KW N  +     IAGTP FMAPEVA GE+Q +P+
Sbjct: 121 LVHCDIKGQNVLIGEDGAKIADFGCAKWTNGKDDRKVQIAGTPFFMAPEVARGEDQGYPS 180

Query: 173 DIWALGCTVIEMATGSPPWKDAKDPVSALYRIAFSGDVPEVPSFLSEQAKDFLEKC 6
           D+WALGCT+IEMATG  PW +  + V+ALYRI FS ++P +PSFLS+QAKDFL KC
Sbjct: 181 DVWALGCTIIEMATGGAPWPNVANAVAALYRIGFSEELPWIPSFLSDQAKDFLSKC 236


>ref|XP_002518446.1| ATP binding protein, putative [Ricinus communis]
           gi|223542291|gb|EEF43833.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 344

 Score =  307 bits (787), Expect = 1e-81
 Identities = 147/234 (62%), Positives = 180/234 (76%)
 Frame = -2

Query: 707 WTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGFLG 528
           WTRG  +G G+ ATVS+    +S   FAVKS ELS+S+ LQ+EQRILS++ CPQI+ + G
Sbjct: 4   WTRGQILGQGSQATVSIATVQQSGLAFAVKSAELSQSELLQKEQRILSTLSCPQIIAYEG 63

Query: 527 CDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDILHGLDYLHMNQIV 348
            DVT E G  ++N+F+EY  GG L D+I+  GG LDE  IRS+ RDIL GL +LH N IV
Sbjct: 64  YDVTREDGKLLFNIFLEYAPGGTLIDTIRKHGGFLDEGMIRSYARDILLGLHHLHSNGIV 123

Query: 347 HCDIKGKNVLIGSDGAKIADLGCSKWVNEFEVSANPIAGTPVFMAPEVASGEEQSFPADI 168
           HCDIKG N+L+ SDGAKIADLGC++ VN  +VS  PIAGTPV+MAPEVA GE Q FPAD+
Sbjct: 124 HCDIKGHNILVTSDGAKIADLGCARKVN--QVSKTPIAGTPVYMAPEVARGEHQGFPADV 181

Query: 167 WALGCTVIEMATGSPPWKDAKDPVSALYRIAFSGDVPEVPSFLSEQAKDFLEKC 6
           WALGCT+IEMATG PPW    DPVSALY+I +SG VPE+PSF+S+QA DF+ KC
Sbjct: 182 WALGCTIIEMATGRPPWTTISDPVSALYQIGYSGMVPEIPSFMSKQAIDFVSKC 235


Top