BLASTX nr result
ID: Coptis24_contig00031959
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031959 (287 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi... 92 4e-17 emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] 92 4e-17 emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera] 91 8e-17 gb|ABA95230.1| retrotransposon protein, putative, unclassified [... 91 1e-16 gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap... 91 1e-16 >emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group] Length = 806 Score = 92.0 bits (227), Expect = 4e-17 Identities = 46/94 (48%), Positives = 60/94 (63%) Frame = +2 Query: 5 RCAYDHSVFYKETAQGXXXXXXXXXXXXXTGSDIQGISRLKENLSKHFQTKDLGELQYFL 184 +C DH++FY+ + TG D Q I++LKEN+SK F+ KDLG+L+YFL Sbjct: 468 QCNGDHTLFYRHRGKKIAILAVYVDDIIITGDDTQEIAQLKENISKEFEVKDLGQLKYFL 527 Query: 185 GIEVTRYSREVHLSQRKYVLDLLIEIGNLGARTA 286 GIE+ R R + LSQRKYVLDLL + G LG R A Sbjct: 528 GIEIARSPRGIVLSQRKYVLDLLCDTGMLGCRPA 561 >emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] Length = 1015 Score = 92.0 bits (227), Expect = 4e-17 Identities = 46/94 (48%), Positives = 60/94 (63%) Frame = +2 Query: 5 RCAYDHSVFYKETAQGXXXXXXXXXXXXXTGSDIQGISRLKENLSKHFQTKDLGELQYFL 184 +C DH++FY+ + TG D Q I++LKEN+SK F+ KDLG+L+YFL Sbjct: 659 QCNGDHTLFYRHRGKKIAILAVYVDDIIITGDDTQEIAQLKENISKEFEVKDLGQLKYFL 718 Query: 185 GIEVTRYSREVHLSQRKYVLDLLIEIGNLGARTA 286 GIE+ R R + LSQRKYVLDLL + G LG R A Sbjct: 719 GIEIARSPRGIVLSQRKYVLDLLCDTGMLGCRPA 752 >emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera] Length = 1248 Score = 91.3 bits (225), Expect = 8e-17 Identities = 47/88 (53%), Positives = 57/88 (64%) Frame = +2 Query: 17 DHSVFYKETAQGXXXXXXXXXXXXXTGSDIQGISRLKENLSKHFQTKDLGELQYFLGIEV 196 DHSVFY+++A G TGSD GIS LK + F TKDLGEL+YFLG+EV Sbjct: 957 DHSVFYRQSANGIILLVVYVDDIVITGSDCAGISSLKLFMHSKFHTKDLGELKYFLGVEV 1016 Query: 197 TRYSREVHLSQRKYVLDLLIEIGNLGAR 280 +R R + LSQRKYVLDLL E G + A+ Sbjct: 1017 SRSKRGIFLSQRKYVLDLLAETGKMEAK 1044 >gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 936 Score = 90.5 bits (223), Expect = 1e-16 Identities = 48/94 (51%), Positives = 58/94 (61%) Frame = +2 Query: 5 RCAYDHSVFYKETAQGXXXXXXXXXXXXXTGSDIQGISRLKENLSKHFQTKDLGELQYFL 184 +C DH+VFY+ TG D ISRLK+NLSK F+ KDLG+L+YFL Sbjct: 598 QCNGDHTVFYRHNRGLKTILVVYVDDMIITGDDCLEISRLKQNLSKEFEVKDLGQLKYFL 657 Query: 185 GIEVTRYSREVHLSQRKYVLDLLIEIGNLGARTA 286 GIE+ R R + LSQRKYVLDLL + G LG R A Sbjct: 658 GIEIARSPRGIVLSQRKYVLDLLSDTGMLGCRPA 691 >gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group] Length = 894 Score = 90.5 bits (223), Expect = 1e-16 Identities = 48/94 (51%), Positives = 58/94 (61%) Frame = +2 Query: 5 RCAYDHSVFYKETAQGXXXXXXXXXXXXXTGSDIQGISRLKENLSKHFQTKDLGELQYFL 184 +C DH+VFY+ TG D ISRLK+NLSK F+ KDLG+L+YFL Sbjct: 556 QCNGDHTVFYRHNRGLKTILVVYVDDMIITGDDCLEISRLKQNLSKEFEVKDLGQLKYFL 615 Query: 185 GIEVTRYSREVHLSQRKYVLDLLIEIGNLGARTA 286 GIE+ R R + LSQRKYVLDLL + G LG R A Sbjct: 616 GIEIARSPRGIVLSQRKYVLDLLSDTGMLGCRPA 649