BLASTX nr result
ID: Coptis24_contig00031957
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031957 (786 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323391.1| predicted protein [Populus trichocarpa] gi|2... 62 1e-07 >ref|XP_002323391.1| predicted protein [Populus trichocarpa] gi|222868021|gb|EEF05152.1| predicted protein [Populus trichocarpa] Length = 237 Score = 62.0 bits (149), Expect = 1e-07 Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 23/185 (12%) Frame = -2 Query: 719 MSDLSRLGIGLTVVFVISLIALFTELCYLFCRRKK--QTNSPESQNSGEIL--XXXXXXX 552 M+ L+ LGI LTVVF + L AL E+ Y+ RR++ + + S GE Sbjct: 1 MNALNNLGIVLTVVFSVCLAALVFEILYVLWRRRRFLRRSVTSSGADGEFRSNSDSLYTK 60 Query: 551 XSKHLLYYLFCFKNKS------RTEPNVASTTIHPINDEQQDELV-KWREMQEIQGPSRV 393 SK LLY+ FC+KN++ T P AS P+ + D LV + ++Q + GPSRV Sbjct: 61 PSKELLYF-FCWKNQTTRIEPDSTTPQEASAVAPPVPADGADALVEEMLKLQGMYGPSRV 119 Query: 392 LFTIXXXXXXXXXXXXXXSDR-----KFRTKGSYSLNDEEVVMMSMEREIE-------SP 249 LFTI + K R K S E V + E+E +P Sbjct: 120 LFTIKEEEMEVTENDDSSIENELVKSKKRKKSSSDFCFEGAVANDVVVEVEVEVDDVTTP 179 Query: 248 FFTPC 234 F+TPC Sbjct: 180 FWTPC 184