BLASTX nr result
ID: Coptis24_contig00031953
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031953 (765 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 90 5e-16 emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 90 6e-16 ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 87 5e-15 ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 83 6e-14 ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 83 6e-14 >ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 389 Score = 90.1 bits (222), Expect = 5e-16 Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 1/204 (0%) Frame = -1 Query: 723 WTPIARAVGHGTLHDLTYYNGKFYAXXXXXXXXXXXGLEETLDTSTSLEKIIHCPPGDIA 544 WT + A + D+ ++ G FYA + S+ II P Sbjct: 199 WTFLEDAQSYA--EDVIFHRGLFYAVNKYGSIAVCD-----VSGSSPRVSIIEMPQQFGG 251 Query: 543 TQYYIVESSGDLLVVCRYVVHPHNDKFNADGDPLHRFPHKTAGFKVLKLEFGTPCKWVTV 364 Y+VES +LL+V RY+ + ++ + D ++T F+V +L+ P +W V Sbjct: 252 DLQYLVESGEELLLVTRYL----DLTYDVEPDQTSLI-YRTTRFQVCRLDLKAP-RWEVV 305 Query: 363 ENLGNRSLFLGYNXXXXXXXXXXSGCKPNCIYFTDNLVFRFYECKFGGQDFGIFSLEDGS 184 +LG+R+LFLG N GCK NCIY+TD+ Y+ G QD GIF+LEDGS Sbjct: 306 SSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGS 365 Query: 183 IEKFLYPDDNLLI-LPSPIWFAPN 115 IE P + I P P+W PN Sbjct: 366 IEPL--PCSHFRIRWPPPLWVTPN 387 >emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] Length = 389 Score = 89.7 bits (221), Expect = 6e-16 Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 1/204 (0%) Frame = -1 Query: 723 WTPIARAVGHGTLHDLTYYNGKFYAXXXXXXXXXXXGLEETLDTSTSLEKIIHCPPGDIA 544 WT + A + D+ ++ G FYA + S+ II P Sbjct: 199 WTFLEDAQSYS--EDVIFHRGLFYAVNKYGSIAVCD-----VSGSSPRVSIIEMPQQFGG 251 Query: 543 TQYYIVESSGDLLVVCRYVVHPHNDKFNADGDPLHRFPHKTAGFKVLKLEFGTPCKWVTV 364 Y+VES +LL+V RY+ + ++ + D ++T F+V +L+ P +W V Sbjct: 252 DLQYLVESGEELLLVTRYL----DLTYDVEXDQTSLI-YRTTRFQVCRLDSKAP-RWEVV 305 Query: 363 ENLGNRSLFLGYNXXXXXXXXXXSGCKPNCIYFTDNLVFRFYECKFGGQDFGIFSLEDGS 184 +LG+R+LFLG N GCK NCIY+TD+ Y+ G QD GIF+LEDGS Sbjct: 306 SSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGS 365 Query: 183 IEKFLYPDDNLLI-LPSPIWFAPN 115 IE P + I P P+W PN Sbjct: 366 IEPL--PCSHFRIRWPPPLWVTPN 387 >ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1| predicted protein [Populus trichocarpa] Length = 393 Score = 86.7 bits (213), Expect = 5e-15 Identities = 65/194 (33%), Positives = 90/194 (46%), Gaps = 5/194 (2%) Frame = -1 Query: 681 DLTYYNGKFYAXXXXXXXXXXXGLEETLDTSTSLEKI--IHCPPGDIATQYYIVESSGDL 508 D+ Y+NG FYA D + + K+ I P Y+V S L Sbjct: 215 DVIYFNGLFYAVNKAGQIV-------VCDVNGNSPKVSFIETPRQIGGDMQYLVSSGDGL 267 Query: 507 LVVCRYVVHPHNDKFNADGDPLHRFPHKTAGFKVLKLEFGTPCKWVTVENLGNRSLFLGY 328 L+V RY+ + + D F +KTA F+V KL+ P +W V +LG+ LF+G Sbjct: 268 LLVTRYL------DLDVEFDI---FIYKTARFEVFKLDLNGP-RWERVTSLGDMMLFIGE 317 Query: 327 NXXXXXXXXXXSGCKPNCIYFTDNLVFRFYECKFGGQDFGIFSLEDGSIEKF-LYPDDNL 151 N SGC +CIY+TD+ Y+ G D GIF L DGSIE YP ++ Sbjct: 318 NSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSY 377 Query: 150 --LILPSPIWFAPN 115 L P P+W +PN Sbjct: 378 SRLQWPPPLWISPN 391 >ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus] Length = 458 Score = 83.2 bits (204), Expect = 6e-14 Identities = 65/189 (34%), Positives = 87/189 (46%), Gaps = 4/189 (2%) Frame = -1 Query: 681 DLTYYNGKFYAXXXXXXXXXXXGLEETLDTSTSLEKIIHCPPGDIATQYYIVESSGDLLV 502 D+ +NG+FYA L E+ T + + + GD + ++E +G+LL+ Sbjct: 203 DVILFNGEFYAVDNSGATF----LVESQHKVTLIAEPVF--GGD---KKILMECNGELLL 253 Query: 501 VCRYVVHPHNDKFNADGDPLHRFPH-KTAGFKVLKLEFGTPCKWVTVENLGNRSLFLGYN 325 V Y+ + F DG+P H KT GFKV KL KW V +LGN LFLG N Sbjct: 254 VDMYLTVDSEEGFGLDGEPTEGVLHEKTVGFKVFKLHRNGSKKWTVVCDLGNTMLFLGEN 313 Query: 324 XXXXXXXXXXSGCKPNCIYFTDNLVFRFY--ECKFGGQDFGIFSLEDGSIEKFL-YPDDN 154 SGCK NCI+FTD + + F G D IF LE G+I P + Sbjct: 314 CSFSASASGVSGCKGNCIFFTDGFLCPNVDEDDVFKGSDIAIFDLEFGTISPLSDSPMYS 373 Query: 153 LLILPSPIW 127 L P P W Sbjct: 374 RLFWPPPSW 382 >ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus] Length = 404 Score = 83.2 bits (204), Expect = 6e-14 Identities = 65/189 (34%), Positives = 87/189 (46%), Gaps = 4/189 (2%) Frame = -1 Query: 681 DLTYYNGKFYAXXXXXXXXXXXGLEETLDTSTSLEKIIHCPPGDIATQYYIVESSGDLLV 502 D+ +NG+FYA L E+ T + + + GD + ++E +G+LL+ Sbjct: 203 DVILFNGEFYAVDNSGATF----LVESQHKVTLIAEPVF--GGD---KKILMECNGELLL 253 Query: 501 VCRYVVHPHNDKFNADGDPLHRFPH-KTAGFKVLKLEFGTPCKWVTVENLGNRSLFLGYN 325 V Y+ + F DG+P H KT GFKV KL KW V +LGN LFLG N Sbjct: 254 VDMYLTVDSEEGFGLDGEPTEGVLHEKTVGFKVFKLHRNGSKKWTVVCDLGNTMLFLGEN 313 Query: 324 XXXXXXXXXXSGCKPNCIYFTDNLVFRFY--ECKFGGQDFGIFSLEDGSIEKFL-YPDDN 154 SGCK NCI+FTD + + F G D IF LE G+I P + Sbjct: 314 CSFSASASGVSGCKGNCIFFTDGFLCPNVDEDDVFKGSDIAIFDLEFGTISPLSDSPMYS 373 Query: 153 LLILPSPIW 127 L P P W Sbjct: 374 RLFWPPPSW 382