BLASTX nr result

ID: Coptis24_contig00031944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031944
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   172   2e-41
ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putat...   168   4e-40
ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   164   5e-39
ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   154   9e-36
ref|XP_003542653.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   152   4e-35

>ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
           vinifera]
          Length = 587

 Score =  172 bits (437), Expect = 2e-41
 Identities = 81/109 (74%), Positives = 89/109 (81%), Gaps = 3/109 (2%)
 Frame = -1

Query: 382 DSGEGESSTALPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYLCQQKRNV 203
           +  +G + + LPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRY CQQK N 
Sbjct: 180 EGADGANLSNLPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQKNNA 239

Query: 202 VS---NGTVGNDSNESKKSKLCLACDMDAIFSAVFSGDRTPYSPAKFLY 65
            +        NDSN +K  +LCLACDMDA+FSAVFSGDRTPYSPAKFLY
Sbjct: 240 SNASKRNAASNDSNSNKNLRLCLACDMDAMFSAVFSGDRTPYSPAKFLY 288


>ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223529676|gb|EEF31620.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 577

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/109 (75%), Positives = 93/109 (85%), Gaps = 2/109 (1%)
 Frame = -1

Query: 385 LDSGEG--ESSTALPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYLCQQK 212
           ++SG    E S+ +P GLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRY CQQ 
Sbjct: 169 MESGSSPLEYSSEMPRGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQM 228

Query: 211 RNVVSNGTVGNDSNESKKSKLCLACDMDAIFSAVFSGDRTPYSPAKFLY 65
           +N V+NG   N+SN +K +KLCLACD+DA+FSAVFSGDR PYSPAKFLY
Sbjct: 229 KNGVNNGAFNNNSN-NKNAKLCLACDLDAMFSAVFSGDRMPYSPAKFLY 276


>ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus] gi|449518463|ref|XP_004166261.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 602

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/100 (76%), Positives = 86/100 (86%)
 Frame = -1

Query: 364 SSTALPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYLCQQKRNVVSNGTV 185
           S + LPWGLRGLNNLGNTCFMNSVLQALLHTPPLRN+FLSDRHNRY CQ+  N  +  + 
Sbjct: 204 SESELPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNFFLSDRHNRYFCQRNVNGSNVSSN 263

Query: 184 GNDSNESKKSKLCLACDMDAIFSAVFSGDRTPYSPAKFLY 65
            ND N SK S++CLACD+DA+FSAVFSGDRTPYSPAKFL+
Sbjct: 264 VNDGNGSKNSRICLACDLDAMFSAVFSGDRTPYSPAKFLF 303


>ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 592

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/101 (73%), Positives = 83/101 (82%), Gaps = 2/101 (1%)
 Frame = -1

Query: 361 STALPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYLCQQKRNVVSNGTV- 185
           S  LP GLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRY CQ+K N   +G + 
Sbjct: 193 SPDLPRGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYFCQKKNNGDVDGALK 252

Query: 184 -GNDSNESKKSKLCLACDMDAIFSAVFSGDRTPYSPAKFLY 65
               +N +K ++ CLACDMDA+FS+VFSGDR PYSPAKFLY
Sbjct: 253 RSGGNNGNKNARTCLACDMDAMFSSVFSGDRAPYSPAKFLY 293


>ref|XP_003542653.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 594

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/109 (69%), Positives = 85/109 (77%), Gaps = 8/109 (7%)
 Frame = -1

Query: 367 ESSTALPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYLCQQKRNVVSNGT 188
           + S  LP GLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNR+ CQ+K    +NG 
Sbjct: 191 DHSPGLPRGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRFFCQKK----NNGD 246

Query: 187 VGND--------SNESKKSKLCLACDMDAIFSAVFSGDRTPYSPAKFLY 65
           V  D        +N +K +++CLACDMDA FSAVFSGDR PYSPAKFLY
Sbjct: 247 VDVDAAVKRSGGNNGNKNARICLACDMDATFSAVFSGDRAPYSPAKFLY 295


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