BLASTX nr result

ID: Coptis24_contig00031914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031914
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35687.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_003635271.1| PREDICTED: probable LRR receptor-like serine...    67   1e-09
ref|XP_002519034.1| Serine/threonine-protein kinase PBS1, putati...    67   2e-09
ref|XP_004146592.1| PREDICTED: probable leucine-rich repeat rece...    64   2e-08
dbj|BAK07460.1| predicted protein [Hordeum vulgare subsp. vulgare]     61   8e-08

>emb|CBI35687.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
 Frame = +1

Query: 220 TDMSCNCFSASIFDRKKKSD-----IDEPLPGKIKLFTYNELSTATNHFHASNKIGRGGF 384
           T MSC+CF  S  D K K +     ID  L  K K  ++NEL  AT++FH S+KIGRGGF
Sbjct: 76  TVMSCSCFGVSTADSKGKGNRASQKIDGNLLEKTKQISFNELKKATDNFHPSSKIGRGGF 135

Query: 385 GTVYKG 402
           GTVYKG
Sbjct: 136 GTVYKG 141


>ref|XP_003635271.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56140-like [Vitis vinifera]
          Length = 364

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
 Frame = +1

Query: 226 MSCNCFSASIFDRKKKSD-----IDEPLPGKIKLFTYNELSTATNHFHASNKIGRGGFGT 390
           MSC+CF  S  D K K +     ID  L  K K  ++NEL  AT++FH S+KIGRGGFGT
Sbjct: 1   MSCSCFGVSTADSKGKGNRASQKIDGNLLEKTKQISFNELKKATDNFHPSSKIGRGGFGT 60

Query: 391 VYKG 402
           VYKG
Sbjct: 61  VYKG 64


>ref|XP_002519034.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223541697|gb|EEF43245.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 367

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/59 (52%), Positives = 39/59 (66%)
 Frame = +1

Query: 226 MSCNCFSASIFDRKKKSDIDEPLPGKIKLFTYNELSTATNHFHASNKIGRGGFGTVYKG 402
           M C+CF +     +   D DE L   I  F+YN+L +ATN+FH +NKIGRGGFG VYKG
Sbjct: 1   MRCSCFGSKGSAARPNLDADEELLRDINHFSYNQLRSATNNFHLTNKIGRGGFGIVYKG 59


>ref|XP_004146592.1| PREDICTED: probable leucine-rich repeat receptor-like
           serine/threonine-protein kinase At3g14840-like [Cucumis
           sativus] gi|449488434|ref|XP_004158036.1| PREDICTED:
           probable leucine-rich repeat receptor-like
           serine/threonine-protein kinase At3g14840-like [Cucumis
           sativus]
          Length = 383

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
 Frame = +1

Query: 214 TDTDMSCNCFSASIFDRKKKS-----DIDEPLPGKIKLFTYNELSTATNHFHASNKIGRG 378
           T   MSC CF +S  ++++ S     ++D  L   +K  ++NEL +A++ FH++N+IGRG
Sbjct: 9   TAPSMSCICFGSSTLEKERISTRADKELDIDLLENVKQISFNELRSASDDFHSNNRIGRG 68

Query: 379 GFGTVYKG 402
           GFGTVYKG
Sbjct: 69  GFGTVYKG 76


>dbj|BAK07460.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 368

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
 Frame = +1

Query: 232 CNCFSASIFDRKKKSDIDEPLPG------KIKLFTYNELSTATNHFHASNKIGRGGFGTV 393
           C CF  S    K  S +     G      KI+LF+Y EL +ATN+FH SN IGRGGFGTV
Sbjct: 5   CCCFRVSSKKEKHASGLYSRSMGRLSSEKKIRLFSYAELRSATNNFHRSNNIGRGGFGTV 64

Query: 394 YKG 402
           YKG
Sbjct: 65  YKG 67


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