BLASTX nr result

ID: Coptis24_contig00031895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031895
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]    50   1e-06
emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]    49   2e-06
emb|CAN69820.1| hypothetical protein VITISV_025709 [Vitis vinifera]    49   3e-06
emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]    50   5e-06
emb|CAN69853.1| hypothetical protein VITISV_001415 [Vitis vinifera]    50   5e-06

>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score = 50.1 bits (118), Expect(2) = 1e-06
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +2

Query: 5    AWKLIQGVAATDDRAQNVGVKLCSRYRLC-RSEETVEHLLWHCSFTQQLWSWIFCAFKVT 181
            AW+   G A T D  Q  G  L +R  +C   EET++HLL HCS T+ LW  +F  F V+
Sbjct: 1699 AWEAAWGKALTLDLVQRRGWSLANRCYMCMEKEETIDHLLLHCSKTRVLWELLFSLFGVS 1758



 Score = 26.9 bits (58), Expect(2) = 1e-06
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 288  TIWKQRNRMTFDDKVPDLNQRK 353
            T+WK RNR+ F D V  + + K
Sbjct: 1795 TVWKARNRLAFKDDVISIQRLK 1816


>emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]
          Length = 2095

 Score = 49.3 bits (116), Expect(2) = 2e-06
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +2

Query: 5    AWKLIQGVAATDDRAQNVGVKLCSRYRLCRSEE-TVEHLLWHCSFTQQLWSWIFCAFKVT 181
            AW+   G   T ++ Q  G  L +R  LC SEE TV+HLL HC  T+ LW+ +F  F ++
Sbjct: 1947 AWEAXWGKVLTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHCIKTRVLWNLLFSLFGIS 2006



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 288  TIWKQRNRMTFDDKVPDLNQRK 353
            T+WK+RNR+ F D+   L + K
Sbjct: 2043 TVWKERNRLAFGDEDLSLQRLK 2064


>emb|CAN69820.1| hypothetical protein VITISV_025709 [Vitis vinifera]
          Length = 779

 Score = 48.9 bits (115), Expect(2) = 3e-06
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +2

Query: 5   AWKLIQGVAATDDRAQNVGVKLCSRYRLCRSEE-TVEHLLWHCSFTQQLWSWIFCAFKVT 181
           AW+   G   T ++ Q  G  L +R  LC SEE TV+HLL HC  T+ LW+ +F  F ++
Sbjct: 566 AWEASWGKVLTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHCIKTRVLWNLLFSLFGIS 625



 Score = 26.9 bits (58), Expect(2) = 3e-06
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 288 TIWKQRNRMTFDDKVPDLNQRK 353
           T+WK+RNR+ F D+   L + K
Sbjct: 662 TVWKERNRLAFGDEDLSLQRLK 683


>emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]
          Length = 1636

 Score = 49.7 bits (117), Expect(2) = 5e-06
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +2

Query: 5    AWKLIQGVAATDDRAQNVGVKLCSRYRLCRSEE-TVEHLLWHCSFTQQLWSWIFCAFKVT 181
            AW+   G   T ++ Q  G  L +R  LC SEE TV+HLL HC  T+ LW+ +F  F ++
Sbjct: 1488 AWEASWGKVLTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHCVKTRDLWNLLFSLFGIS 1547



 Score = 25.4 bits (54), Expect(2) = 5e-06
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 288  TIWKQRNRMTFDDKVPDLNQRK 353
            ++WK+RNR+ F D+   L + K
Sbjct: 1584 SVWKERNRLAFGDEDLSLQRLK 1605


>emb|CAN69853.1| hypothetical protein VITISV_001415 [Vitis vinifera]
          Length = 365

 Score = 50.4 bits (119), Expect(2) = 5e-06
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +2

Query: 5   AWKLIQGVAATDDRAQNVGVKLCSRYRLC-RSEETVEHLLWHCSFTQQLWSWIFCAFKVT 181
           AW+   G A T D  Q  G  L +RY +C   EE + HLL HCS T+ LW  +F  F+V+
Sbjct: 216 AWEXXWGKALTLDMVQKRGWALENRYFMCLEKEENINHLLLHCSRTRVLWDLLFSLFRVS 275



 Score = 24.6 bits (52), Expect(2) = 5e-06
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 288 TIWKQRNRMTFDD 326
           T+WK RNR+ F D
Sbjct: 312 TVWKARNRLAFKD 324


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