BLASTX nr result

ID: Coptis24_contig00031884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031884
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303855.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002512727.1| protein with unknown function [Ricinus commu...    73   2e-11
ref|XP_002332071.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_003546912.1| PREDICTED: putative receptor-like protein ki...    59   4e-07
ref|XP_003543707.1| PREDICTED: putative receptor-like protein ki...    58   7e-07

>ref|XP_002303855.1| predicted protein [Populus trichocarpa] gi|222841287|gb|EEE78834.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = -3

Query: 296 KNNRVDYNAKTLNLNGNGIGAGVNDNSTRAKGSYHKGKEISIAVIDGEDWN-KFVPYDDE 120
           KN+R  YN K LNLN     A +   S    G+  KGKE+S   I G+DWN +FVPYDDE
Sbjct: 292 KNSRTCYNVKALNLNSVNYNANIAGESDVKVGN-GKGKEVSSVDIGGDDWNCRFVPYDDE 350

Query: 119 LCSIYHSKELNPSDMSTPVDDPTAS 45
            CS  HSKELN +  S  VDD  +S
Sbjct: 351 FCSNDHSKELNCNSFSV-VDDSASS 374


>ref|XP_002512727.1| protein with unknown function [Ricinus communis]
           gi|223547738|gb|EEF49230.1| protein with unknown
           function [Ricinus communis]
          Length = 532

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
 Frame = -3

Query: 359 SANEVNFXXXXXXXXXXXSPYKNNRVDYNAKTLNLNGNGIGAGVNDNSTRAKGSYHKGKE 180
           S NEV+F              KN+R  YN + LNLN     A +   S  AK    KGKE
Sbjct: 111 SCNEVDFALALQASSSS----KNSRTCYNVRALNLNSLNYNANIASESD-AKAGNGKGKE 165

Query: 179 IS-IAVIDGEDWN-KFVPYDDELCSIYHSKELNPSDMSTPVDDPTAS 45
           +S + +  G+DWN KFVPYDDE CSI HSKELN +  S+ VDD T +
Sbjct: 166 VSGVDIGGGDDWNCKFVPYDDEPCSIDHSKELNCTG-SSLVDDSTGT 211


>ref|XP_002332071.1| predicted protein [Populus trichocarpa] gi|222831957|gb|EEE70434.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/81 (51%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = -3

Query: 296 KNNRVDYNAKTLNLNGNGIGAGVNDNSTRAKGSYHKGKEISIAVIDGEDWN-KFVPYDDE 120
           KNNR  YN K LNLN     A +   S   K    KGKE+S   I   DWN KFVPYDD+
Sbjct: 31  KNNRTCYNVKALNLNSLNDNANIVSESV-VKVRNGKGKEVSSVDIGWGDWNCKFVPYDDD 89

Query: 119 LCSIYHSKELNPSDMSTPVDD 57
            CS  HSKELN  + S+ VDD
Sbjct: 90  FCSNDHSKELN-CNSSSVVDD 109


>ref|XP_003546912.1| PREDICTED: putative receptor-like protein kinase At1g80870-like
           [Glycine max]
          Length = 712

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -3

Query: 296 KNNRVDYNAKTLNLNGNGIGAGVNDNSTRAKGSYHKGKEISIAVIDGEDWN-KFVPYDDE 120
           KN+R  +N K LNLN     A +  + T  +    KGKEIS   +D +DWN KF P DDE
Sbjct: 288 KNSRTCFNVKALNLNSLNYNANIA-SETEIRSVNAKGKEIS--ALDRDDWNGKFFPCDDE 344

Query: 119 LCSIYHSKELNPSDMSTPVDDPTAS 45
           L SI +SKEL  S  S  VDD  A+
Sbjct: 345 LSSIDYSKELTVS-ASPLVDDEKAN 368


>ref|XP_003543707.1| PREDICTED: putative receptor-like protein kinase At1g80870-like
           [Glycine max]
          Length = 712

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = -3

Query: 296 KNNRVDYNAKTLNLNGNGIGAGVNDNSTRAKGSYHKGKEISIAVIDGEDWN-KFVPYDDE 120
           KN+R  +N K LNLN     A +    T  +    KGKE+S   +D +DWN KF P DDE
Sbjct: 288 KNSRTCFNVKALNLNSLNYNANIA-TETEIRSVNAKGKEVS--ALDRDDWNGKFFPCDDE 344

Query: 119 LCSIYHSKELNPSDMSTPVDDPTAS 45
           L SI +SKEL  S  S  VDD  A+
Sbjct: 345 LSSIDYSKELTVS-ASPLVDDEKAN 368


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