BLASTX nr result

ID: Coptis24_contig00031880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031880
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541729.1| PREDICTED: glyoxysomal processing protease, ...    79   5e-13
ref|XP_002273997.2| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal ...    77   1e-12
emb|CBI30593.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002305124.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_004155645.1| PREDICTED: glyoxysomal processing protease, ...    75   4e-12

>ref|XP_003541729.1| PREDICTED: glyoxysomal processing protease, glyoxysomal-like
           [Glycine max]
          Length = 749

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
 Frame = +3

Query: 99  KMELPQVVELARKFAVMVRTHGPDPKGLKMQEHAFHRRSRSGKTAISASGMLLPEFCGRP 278
           KM L   V  AR FAVMVR  GPDPKGLKM+ HAFH + RSG+T +SASG+L+P+     
Sbjct: 12  KMVLSDAVNFARNFAVMVRVRGPDPKGLKMRNHAFH-QYRSGETTLSASGVLVPDTLCDS 70

Query: 279 LIGTHIQ-DGHDXXXXXXXXXXXXEPFVLPQYRD 377
            + T +  D  +            EPF+ PQ RD
Sbjct: 71  QVATRLNGDNCEDRVLVVTVASVVEPFLSPQQRD 104


>ref|XP_002273997.2| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal processing protease,
           glyoxysomal-like [Vitis vinifera]
          Length = 753

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/54 (68%), Positives = 44/54 (81%)
 Frame = +3

Query: 102 MELPQVVELARKFAVMVRTHGPDPKGLKMQEHAFHRRSRSGKTAISASGMLLPE 263
           M LP++V+ AR FAVMVR  GPDPKGLKM++HAFH    SGKT +SASGMLLP+
Sbjct: 1   MGLPEIVDFARNFAVMVRVQGPDPKGLKMRKHAFH-HYHSGKTTLSASGMLLPD 53


>emb|CBI30593.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/54 (68%), Positives = 44/54 (81%)
 Frame = +3

Query: 102 MELPQVVELARKFAVMVRTHGPDPKGLKMQEHAFHRRSRSGKTAISASGMLLPE 263
           M LP++V+ AR FAVMVR  GPDPKGLKM++HAFH    SGKT +SASGMLLP+
Sbjct: 1   MGLPEIVDFARNFAVMVRVQGPDPKGLKMRKHAFH-HYHSGKTTLSASGMLLPD 53


>ref|XP_002305124.1| predicted protein [Populus trichocarpa] gi|222848088|gb|EEE85635.1|
           predicted protein [Populus trichocarpa]
          Length = 752

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/54 (66%), Positives = 46/54 (85%)
 Frame = +3

Query: 102 MELPQVVELARKFAVMVRTHGPDPKGLKMQEHAFHRRSRSGKTAISASGMLLPE 263
           M LP++V+ AR FAVMVR  GPDPKGLKM++HAFH+ + SGKT +SASG+LLP+
Sbjct: 1   MGLPEIVDFARNFAVMVRIQGPDPKGLKMRKHAFHQYN-SGKTTLSASGLLLPD 53


>ref|XP_004155645.1| PREDICTED: glyoxysomal processing protease, glyoxysomal-like
           [Cucumis sativus]
          Length = 747

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = +3

Query: 114 QVVELARKFAVMVRTHGPDPKGLKMQEHAFHRRSRSGKTAISASGMLLPEFCGRPLIGTH 293
           ++V+ AR FA+MVR  GPDPKGLKMQ+HAFH +  SG+T +SASGM+LPE         H
Sbjct: 5   EIVDHARNFAIMVRVQGPDPKGLKMQKHAFH-QYHSGRTTLSASGMILPETLYDTRAAKH 63

Query: 294 IQDGHD-XXXXXXXXXXXXEPFVLPQYRDK 380
           + +  D             EPF+  Q+RDK
Sbjct: 64  LGNYKDQFATLVLTVSSIFEPFMPLQHRDK 93


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