BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031850
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             111   5e-23
emb|CAN77352.1| hypothetical protein VITISV_011397 [Vitis vinifera]   109   2e-22
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     108   3e-22
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             108   4e-22
gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thali...   104   8e-21

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  111 bits (278), Expect = 5e-23
 Identities = 60/166 (36%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
 Frame = -1

Query: 503  LYLGATEYAXXXXXXXXXXXVEKPVYFQSKTLLDAETRYSRVERYALALVFSSLKLKPYF 324
            LY+  +++A            ++P+++ SK+L++AETRY  +E+ ALA+V S+ KL+PYF
Sbjct: 1123 LYIAVSDHAVSSVLVREDRGEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYF 1182

Query: 323  ESHSVVVVTNLPLKQALRT-EKSGRMLKWAVMLSAYEIQYQVRTAEKAQAVAEFLAEFPA 147
            +SH++ V+T+ PL+ AL +  +SGRM KWAV LS Y+I ++ R A K+Q +A+FL E P 
Sbjct: 1183 QSHTIAVLTDQPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIELPL 1242

Query: 146  EDPTWGXXXXXXXXXXXETDFLDPWDKRNGWRVFVDGSATDTCSGI 9
            +                  +     ++   W ++VDGS++   SGI
Sbjct: 1243 QS----------------AERAVSGNRGEEWSLYVDGSSSARGSGI 1272


>emb|CAN77352.1| hypothetical protein VITISV_011397 [Vitis vinifera]
          Length = 864

 Score =  109 bits (273), Expect = 2e-22
 Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
 Frame = -1

Query: 440 EKPVYFQSKTLLDAETRYSRVERYALALVFSSLKLKPYFESHSVVVVTNLPLKQAL-RTE 264
           ++PVYF SK   DAETRYSR+E+ ALAL  ++ KL+PYF++H + V TN PL+  L +++
Sbjct: 293 QRPVYFISKAFADAETRYSRMEQTALALRTAAQKLRPYFQAHPITVFTNQPLRNVLHKSD 352

Query: 263 KSGRMLKWAVMLSAYEIQYQVRTAEKAQAVAEFLAEFP---AEDPTWGXXXXXXXXXXXE 93
            +GRML+WA+ L+ Y I YQ R + K Q +A+F+AE P   A D  W             
Sbjct: 353 ITGRMLRWAIELNEYGIDYQPRLSLKGQVMADFIAELPEVRAPDKKWTP----------- 401

Query: 92  TDFLDPWDKRNGWRVFVDGSATDTCSGID 6
               D W     W + VDG++  + SG++
Sbjct: 402 ----DDW-----WSLHVDGASRSSGSGVE 421


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  108 bits (271), Expect = 3e-22
 Identities = 66/166 (39%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
 Frame = -1

Query: 503  LYLGATEYAXXXXXXXXXXXVEKPVYFQSKTLLDAETRYSRVERYALALVFSSLKLKPYF 324
            LY+  T               + P+YF S TLL AET Y  +E+ A A+V ++ KLKPYF
Sbjct: 609  LYIAVTSATVSAVIIREEDKQQHPIYFISHTLLAAETNYPLIEKAAFAVVVAARKLKPYF 668

Query: 323  ESHSVVVVTNLPLKQALRT-EKSGRMLKWAVMLSAYEIQYQVRTAEKAQAVAEFLAEFP- 150
             +H V V+T+ PL++AL   EKSGR++KWAV LS + IQY+ R + K QA+A+FLAE   
Sbjct: 669  NAHPVTVLTDQPLEKALENFEKSGRLIKWAVELSGFGIQYKPRPSIKGQALADFLAECTY 728

Query: 149  AEDPTWGXXXXXXXXXXXETDFLDPWDKRNGWRVFVDGSATDTCSG 12
             E+P  G                        W V+ DGS+T   SG
Sbjct: 729  QEEPNPGV-----------------------WEVYTDGSSTTNSSG 751


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  108 bits (270), Expect = 4e-22
 Identities = 56/132 (42%), Positives = 84/132 (63%), Gaps = 8/132 (6%)
 Frame = -1

Query: 503 LYLGATEYAXXXXXXXXXXXVEKPVYFQSKTLLDAETRYSRVERYALALVFSSLKLKPYF 324
           LY+  + +A            +KP+Y+ SK++ D ETRY+ +E+ ALA+V S+ KL+PYF
Sbjct: 320 LYVSVSNHAVSGVLVREDRGEQKPIYYVSKSMTDPETRYTMMEKLALAVVTSARKLRPYF 379

Query: 323 ESHSVVVVTNLPLKQALRT-EKSGRMLKWAVMLSAYEIQYQVRTAEKAQAVAEFLAEFP- 150
           +SH V V+TN PL+  L +  +SGR+ KWAV LS Y+I+++ R + KAQ +A+FL E P 
Sbjct: 380 QSHPVQVLTNQPLRTILHSPSQSGRLAKWAVELSEYDIEFKSRISMKAQVLADFLTELPI 439

Query: 149 ------AEDPTW 132
                  E+ TW
Sbjct: 440 PGTIERPENQTW 451


>gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 1295

 Score =  104 bits (259), Expect = 8e-21
 Identities = 47/98 (47%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
 Frame = -1

Query: 440  EKPVYFQSKTLLDAETRYSRVERYALALVFSSLKLKPYFESHSVVVVTNLPLKQALRT-E 264
            E+P+++ SK+  DAETRY  +E+ ALA+V S+ KL+PYF+SH +VV+T+LPL+  L +  
Sbjct: 813  ERPIFYVSKSFSDAETRYPMMEKLALAVVTSARKLRPYFQSHPIVVLTSLPLRAILHSPS 872

Query: 263  KSGRMLKWAVMLSAYEIQYQVRTAEKAQAVAEFLAEFP 150
            +SGR+ KWA+ LS ++++++ RT+ K+Q +A+FL E P
Sbjct: 873  QSGRLAKWAIELSEFDLEFRARTSLKSQVLADFLIELP 910