BLASTX nr result
ID: Coptis24_contig00031846
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031846 (424 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt... 134 2e-44 emb|CBI22273.3| unnamed protein product [Vitis vinifera] 134 2e-44 ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt... 135 2e-42 ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] ... 133 9e-41 gb|AAR88654.1| rRNA methylase-like protein [Viscum album] 124 1e-38 >ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis vinifera] Length = 372 Score = 134 bits (337), Expect(2) = 2e-44 Identities = 63/74 (85%), Positives = 70/74 (94%) Frame = +2 Query: 203 LDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVHVISCDSTKRYRD 382 ++VRKER R VV++RSYSVCLVVEGL DFGNVSA FRSADALGFQSVHV+SCDS+KRY+D Sbjct: 158 MEVRKERFRNVVKSRSYSVCLVVEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKRYKD 217 Query: 383 NRHVSMGAEKWLDI 424 NRHVSMGAEKWLDI Sbjct: 218 NRHVSMGAEKWLDI 231 Score = 69.7 bits (169), Expect(2) = 2e-44 Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 6/67 (8%) Frame = +1 Query: 16 EDINKDRVEELLKRKEDDIARLMKMERKSDIGSEG------RWFPYLDVFRAGKSFLTSE 177 +D NKD VE LL DD+ RLMKMER+S G G RWFPYLD F+ G +FL+S Sbjct: 89 DDSNKDIVEHLLTNT-DDVGRLMKMERRSMTGDGGELIQSKRWFPYLDKFKTGTTFLSSS 147 Query: 178 EILEAVD 198 EILEA+D Sbjct: 148 EILEAMD 154 >emb|CBI22273.3| unnamed protein product [Vitis vinifera] Length = 369 Score = 134 bits (337), Expect(2) = 2e-44 Identities = 63/74 (85%), Positives = 70/74 (94%) Frame = +2 Query: 203 LDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVHVISCDSTKRYRD 382 ++VRKER R VV++RSYSVCLVVEGL DFGNVSA FRSADALGFQSVHV+SCDS+KRY+D Sbjct: 155 MEVRKERFRNVVKSRSYSVCLVVEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKRYKD 214 Query: 383 NRHVSMGAEKWLDI 424 NRHVSMGAEKWLDI Sbjct: 215 NRHVSMGAEKWLDI 228 Score = 69.7 bits (169), Expect(2) = 2e-44 Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 6/67 (8%) Frame = +1 Query: 16 EDINKDRVEELLKRKEDDIARLMKMERKSDIGSEG------RWFPYLDVFRAGKSFLTSE 177 +D NKD VE LL DD+ RLMKMER+S G G RWFPYLD F+ G +FL+S Sbjct: 86 DDSNKDIVEHLLTNT-DDVGRLMKMERRSMTGDGGELIQSKRWFPYLDKFKTGTTFLSSS 144 Query: 178 EILEAVD 198 EILEA+D Sbjct: 145 EILEAMD 151 >ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Cucumis sativus] Length = 370 Score = 135 bits (340), Expect(2) = 2e-42 Identities = 64/74 (86%), Positives = 69/74 (93%) Frame = +2 Query: 203 LDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVHVISCDSTKRYRD 382 LD RKER + VV NRSYSVCLVVEGLTDFGNVSA FRSADALGFQSVHV+SCD++KRYR+ Sbjct: 153 LDSRKERFKNVVRNRSYSVCLVVEGLTDFGNVSAAFRSADALGFQSVHVVSCDASKRYRE 212 Query: 383 NRHVSMGAEKWLDI 424 NRHVSMGAEKWLDI Sbjct: 213 NRHVSMGAEKWLDI 226 Score = 62.0 bits (149), Expect(2) = 2e-42 Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 6/65 (9%) Frame = +1 Query: 28 KDRVEELLKRKEDDIARLMKMERKS------DIGSEGRWFPYLDVFRAGKSFLTSEEILE 189 +D VE LL +D+ARLMKMER+S + +GRWFPYLD + G S+L S EILE Sbjct: 88 QDTVEHLLTHS-NDVARLMKMERRSVELDGAEYPHKGRWFPYLDKYSCGSSWLNSGEILE 146 Query: 190 AVDTL 204 A+D+L Sbjct: 147 ALDSL 151 >ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] gi|223527332|gb|EEF29478.1| rRNA methylase, putative [Ricinus communis] Length = 334 Score = 133 bits (334), Expect(2) = 9e-41 Identities = 63/74 (85%), Positives = 69/74 (93%) Frame = +2 Query: 203 LDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVHVISCDSTKRYRD 382 ++ RKER VV+NRSYSVCLVVEGL+DFGNVSA FRSADALGFQSVHV+SCDS+KRYRD Sbjct: 120 MEDRKERFANVVKNRSYSVCLVVEGLSDFGNVSAAFRSADALGFQSVHVVSCDSSKRYRD 179 Query: 383 NRHVSMGAEKWLDI 424 NRHVSMGAEKWLDI Sbjct: 180 NRHVSMGAEKWLDI 193 Score = 58.9 bits (141), Expect(2) = 9e-41 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%) Frame = +1 Query: 16 EDINKDRVEELLKRKEDDIARLMKMERKSDIGSEG-RWFPYLDVFRAGKSFLTSEEILEA 192 +D + VE LL + DD+ RLMKMER+ D G RWFPYLD ++ G L+ E+LEA Sbjct: 56 DDSKNETVEHLLSNR-DDVLRLMKMERRPDAEKSGSRWFPYLDRYKCGSGELSGSEVLEA 114 Query: 193 V 195 V Sbjct: 115 V 115 >gb|AAR88654.1| rRNA methylase-like protein [Viscum album] Length = 368 Score = 124 bits (311), Expect(2) = 1e-38 Identities = 61/74 (82%), Positives = 66/74 (89%) Frame = +2 Query: 203 LDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVHVISCDSTKRYRD 382 L RKERI+ VV+NRSYSV LVVEG TDFGN+SA FRSADALG QSVHVISC S+KRYR+ Sbjct: 154 LGSRKERIKDVVKNRSYSVWLVVEGATDFGNISAVFRSADALGLQSVHVISCGSSKRYRE 213 Query: 383 NRHVSMGAEKWLDI 424 NRHVSMGAEKWLDI Sbjct: 214 NRHVSMGAEKWLDI 227 Score = 60.8 bits (146), Expect(2) = 1e-38 Identities = 31/61 (50%), Positives = 43/61 (70%) Frame = +1 Query: 16 EDINKDRVEELLKRKEDDIARLMKMERKSDIGSEGRWFPYLDVFRAGKSFLTSEEILEAV 195 E +K+ VE+LL + + + R+MKMERK + RWFPYLD+F+AG L+S EILEA+ Sbjct: 91 EGSSKETVEKLLSDRTN-VDRMMKMERKLEATEHTRWFPYLDMFKAGNIDLSSSEILEAL 149 Query: 196 D 198 D Sbjct: 150 D 150