BLASTX nr result

ID: Coptis24_contig00031845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031845
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   271   1e-70
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   266   2e-69
ref|NP_176883.5| AAA ATPase containing von Willebrand factor typ...   260   2e-67
gb|AAD10657.1| Hypothetical protein [Arabidopsis thaliana]            260   2e-67
gb|AFW78379.1| hypothetical protein ZEAMMB73_262445 [Zea mays]        253   2e-65

>ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Cucumis sativus]
          Length = 5431

 Score =  271 bits (692), Expect = 1e-70
 Identities = 136/203 (66%), Positives = 165/203 (81%), Gaps = 2/203 (0%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQKLSLAEKGGSMLENITAHPNFFLLATMNPGGDFGKKE 464
            +DEISLADDS+LER+NSVLEPE+KL+LAEKGG  LE +TAHP F L ATMNPGGD+GKKE
Sbjct: 1565 IDEISLADDSVLERINSVLEPERKLALAEKGGEFLETVTAHPEFSLFATMNPGGDYGKKE 1624

Query: 463  LSPALRNRFTEIWVPPVSEMNELRSIALSFVGK-SLSYTVDPMLKFWEWFSQLHTSRTLT 287
            LSPALRNRFTEIWVPPV E++ELRSIAL+ +     ++ VD ML FWEWF+ L + R LT
Sbjct: 1625 LSPALRNRFTEIWVPPVGELDELRSIALTRISNPGDTHLVDLMLNFWEWFNHLQSGRMLT 1684

Query: 286  VRDLLSWVDFMNTTVTSFESPNYAFLHGAFLVLLDGLSLGTGISKHDAGKLREQCLSFLL 107
            VRDLLSWV F+++T  +   P YAFLHGAFL+LLDGLSLGTG+SK DA +LR++C SFLL
Sbjct: 1685 VRDLLSWVSFIDSTEMNL-GPEYAFLHGAFLILLDGLSLGTGMSKRDAEELRKRCFSFLL 1743

Query: 106  QSLK-SDIHSEDSQLSQLQTFGW 41
            + LK  D   E S+L +LQ++GW
Sbjct: 1744 EKLKLDDTLHECSKLVRLQSYGW 1766



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPE-QKLSLAEKGGSMLENITAHPNFFLLATMNPGGDFGKK 467
            +DEI+LA    L+R+  VLE +   L LAE+G   +  I+ HPNF + A MNP  D GK+
Sbjct: 891  LDEINLAPPETLQRVIGVLEGDTSSLCLAERGD--VTYISRHPNFRIFACMNPATDAGKR 948

Query: 466  ELSPALRNRFTEIWVPPVSEMNELRSIALSFV 371
            +L  +LR+RFTE +V  V +  +L      F+
Sbjct: 949  DLPVSLRSRFTEYFVDDVLDDEDLALFVNQFM 980



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQKLSLAEKGGSMLENITAHPNFFLLATMNPGGDF-GKK 467
            +DE++LA   +LE LN +L+  ++L + E    + E I AHP+F L AT NP   + G+K
Sbjct: 1194 LDELNLAPSDVLEALNRLLDDNRELFVPE----LRETIQAHPDFMLFATQNPPTFYGGRK 1249

Query: 466  ELSPALRNRFTEIWVPPVSEMNELRSIALSFVGKSLSYT---VDPM--LKFWEWFSQLHT 302
             LS A RNRF EI V  + E +EL +I         +Y    VD M  L+ +   S++ +
Sbjct: 1250 MLSRAFRNRFVEIHVDEIPE-DELSTIVEKRCEIPQNYAKKMVDVMKELQLFRQRSKVFS 1308

Query: 301  SR--TLTVRDLLSW 266
             +   +T RDL  W
Sbjct: 1309 GKHGFITPRDLFRW 1322


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  266 bits (681), Expect = 2e-69
 Identities = 137/208 (65%), Positives = 161/208 (77%), Gaps = 1/208 (0%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQKLSLAEKGGSMLENITAHPNFFLLATMNPGGDFGKKE 464
            VDEISLADDS+LERLNSVLEPE+KLSLAEKGG ++ENITAH NFF+LATMNPGGD+GKKE
Sbjct: 1489 VDEISLADDSVLERLNSVLEPERKLSLAEKGGPVMENITAHENFFVLATMNPGGDYGKKE 1548

Query: 463  LSPALRNRFTEIWVPPVSEMNELRSIALSFVGK-SLSYTVDPMLKFWEWFSQLHTSRTLT 287
            LSPALRNRFTEIWVPPV +++EL  IA   +    LSY V   LKFWEWF++L   R LT
Sbjct: 1549 LSPALRNRFTEIWVPPVCDLDELGDIASKRLSNPELSYIVGATLKFWEWFNKLEKGRALT 1608

Query: 286  VRDLLSWVDFMNTTVTSFESPNYAFLHGAFLVLLDGLSLGTGISKHDAGKLREQCLSFLL 107
            VRDLLSW+ F+  T      P+ AFLHG FLVLLDG+SLGTGIS+ DAG  RE CLSFLL
Sbjct: 1609 VRDLLSWIQFIMVTKEGL-GPDCAFLHGLFLVLLDGISLGTGISRKDAGLFRETCLSFLL 1667

Query: 106  QSLKSDIHSEDSQLSQLQTFGWDAIGRS 23
            + LK D  S   +LS ++ +GW  +G +
Sbjct: 1668 KELKED--SNLHELSFIENYGWGDLGET 1693



 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQKLSLAEKGGSMLENITAHPNFFLLATMNPGGDF-GKK 467
            +DE++LA   +LE LN +L+  ++L L E    + E + AHPNF L AT NP   + G+K
Sbjct: 1148 LDELNLAPSDVLEALNRLLDDNRELFLPE----LRETVRAHPNFMLFATQNPPTFYGGRK 1203

Query: 466  ELSPALRNRFTEIWVP--PVSEMNELRSIALSFVGKSLSYTVDPM--LKFWEWFSQLHTS 299
             LS A RNRF E+ V   P  E++ +        G      V+ M  L+F    S++   
Sbjct: 1204 MLSRAFRNRFVEVHVDEIPDDELSTIIEKRCKIPGSRARLMVEVMKELQFHRQSSKVFAG 1263

Query: 298  R--TLTVRDLLSWVD 260
            +   +T RDL  W +
Sbjct: 1264 KHGFITPRDLFRWAN 1278



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQ-KLSLAEKGGSMLENITAHPNFFLLATMNPGGDFGKK 467
            +DE++LA    L+R+  VLE E   L LAE+G   + +I  +P+F + A MNP  D GK+
Sbjct: 844  LDEVNLAPPETLQRVIGVLEGEYGSLCLAERGD--VSHIPRNPSFRIFACMNPATDAGKR 901

Query: 466  ELSPALRNRFTEIWVPPVSEMNELRSIALSFVGKSLS 356
            +L  +L++RFT  +V  V + ++L+     F+ +S+S
Sbjct: 902  DLPYSLQSRFTAYFVHDVLDRDDLKLFINKFMEESIS 938


>ref|NP_176883.5| AAA ATPase containing von Willebrand factor type A domain-containing
            protein [Arabidopsis thaliana]
            gi|332196477|gb|AEE34598.1| AAA ATPase containing von
            Willebrand factor type A domain-containing protein
            [Arabidopsis thaliana]
          Length = 5393

 Score =  260 bits (664), Expect = 2e-67
 Identities = 132/205 (64%), Positives = 161/205 (78%), Gaps = 4/205 (1%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQKLSLAEKGGSMLENITAHPNFFLLATMNPGGDFGKKE 464
            VDEISLADDS+LER+NSVLE ++KLSLAEKGG +LE + AH +FF+LATMNPGGD+GKKE
Sbjct: 1519 VDEISLADDSVLERMNSVLETDRKLSLAEKGGPVLEEVVAHEDFFVLATMNPGGDYGKKE 1578

Query: 463  LSPALRNRFTEIWVPPVSEMNELRSIALSFVGK-SLSYTVDPMLKFWEWFSQLHTSRTLT 287
            LSPALRNRFTEIWVPP+++  ELRSIA S +     S  VDP++ FWEWF++LHT RTLT
Sbjct: 1579 LSPALRNRFTEIWVPPITDTEELRSIAFSGLSSLKESNVVDPIINFWEWFNRLHTGRTLT 1638

Query: 286  VRDLLSWVDFMNTTVTSFESPNYAFLHGAFLVLLDGLSLGTGISKHDAGKLREQCLSFLL 107
            VRDLLSWV F+N    S   P YA LHGAFLVLLDGLSLGTG S  D   LRE+C +FLL
Sbjct: 1639 VRDLLSWVAFVNMATESL-GPAYAILHGAFLVLLDGLSLGTGFSGRDGQDLREKCFAFLL 1697

Query: 106  QSLKSDIHSEDS---QLSQLQTFGW 41
            Q L  ++ + D+   +LS+++ +GW
Sbjct: 1698 QQL--ELFASDTLPLELSRMELYGW 1720



 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQKLSLAEKGGSMLENITAHPNFFLLATMNPGGDF-GKK 467
            +DE++LA   +LE LN +L+  ++L + E    + E I+AHPNF L AT NP   + G+K
Sbjct: 1145 LDELNLAPSDVLEALNRLLDDNRELFVPE----LSETISAHPNFMLFATQNPPTLYGGRK 1200

Query: 466  ELSPALRNRFTEIWVP--PVSEMNELRSIALSFVGKSLSYTVDPM--LKFWEWFSQLHTS 299
             LS A RNRF EI V   P  E++E+ +   S      S  V+ M  L+     S+    
Sbjct: 1201 ILSRAFRNRFVEIHVDEIPEDELSEILTTKCSIANSHASKMVEVMKDLQRNRQSSKAFAG 1260

Query: 298  R--TLTVRDLLSW 266
            +   +T RDL  W
Sbjct: 1261 KHGYITPRDLFRW 1273


>gb|AAD10657.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 5138

 Score =  260 bits (664), Expect = 2e-67
 Identities = 132/205 (64%), Positives = 161/205 (78%), Gaps = 4/205 (1%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQKLSLAEKGGSMLENITAHPNFFLLATMNPGGDFGKKE 464
            VDEISLADDS+LER+NSVLE ++KLSLAEKGG +LE + AH +FF+LATMNPGGD+GKKE
Sbjct: 1329 VDEISLADDSVLERMNSVLETDRKLSLAEKGGPVLEEVVAHEDFFVLATMNPGGDYGKKE 1388

Query: 463  LSPALRNRFTEIWVPPVSEMNELRSIALSFVGK-SLSYTVDPMLKFWEWFSQLHTSRTLT 287
            LSPALRNRFTEIWVPP+++  ELRSIA S +     S  VDP++ FWEWF++LHT RTLT
Sbjct: 1389 LSPALRNRFTEIWVPPITDTEELRSIAFSGLSSLKESNVVDPIINFWEWFNRLHTGRTLT 1448

Query: 286  VRDLLSWVDFMNTTVTSFESPNYAFLHGAFLVLLDGLSLGTGISKHDAGKLREQCLSFLL 107
            VRDLLSWV F+N    S   P YA LHGAFLVLLDGLSLGTG S  D   LRE+C +FLL
Sbjct: 1449 VRDLLSWVAFVNMATESL-GPAYAILHGAFLVLLDGLSLGTGFSGRDGQDLREKCFAFLL 1507

Query: 106  QSLKSDIHSEDS---QLSQLQTFGW 41
            Q L  ++ + D+   +LS+++ +GW
Sbjct: 1508 QQL--ELFASDTLPLELSRMELYGW 1530



 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQKLSLAEKGGSMLENITAHPNFFLLATMNPGGDF-GKK 467
            +DE++LA   +LE LN +L+  ++L + E    + E I+AHPNF L AT NP   + G+K
Sbjct: 1032 LDELNLAPSDVLEALNRLLDDNRELFVPE----LSETISAHPNFMLFATQNPPTLYGGRK 1087

Query: 466  ELSPALRNRFTEIWVP--PVSEMNELRSIALSFVGKSLSYTVDPM--LKFWEWFSQLHTS 299
             LS A RNRF EI V   P  E++E+ +   S      S  V+ M  L+     S+    
Sbjct: 1088 ILSRAFRNRFVEIHVDEIPEDELSEILTTKCSIANSHASKMVEVMKDLQRNRQSSKAFAG 1147

Query: 298  R--TLTVRDLLSW 266
            +   +T RDL  W
Sbjct: 1148 KHGYITPRDLFRW 1160


>gb|AFW78379.1| hypothetical protein ZEAMMB73_262445 [Zea mays]
          Length = 2767

 Score =  253 bits (647), Expect = 2e-65
 Identities = 128/203 (63%), Positives = 155/203 (76%), Gaps = 2/203 (0%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQKLSLAEKGGSMLENITAHPNFFLLATMNPGGDFGKKE 464
            +DEISLADDS+LERLNSVLEPE+KLSLAEKGGS+LE I AHPNFF+LATMNPGGD+GKKE
Sbjct: 1099 IDEISLADDSVLERLNSVLEPERKLSLAEKGGSVLEKIVAHPNFFILATMNPGGDYGKKE 1158

Query: 463  LSPALRNRFTEIWVPPVSEMNELRSIALS-FVGKSLSYTVDPMLKFWEWFSQLHTSRTLT 287
            LSPALRNRFTEIWVP V +++ELRSI    F     S   D ++ FW+WF+QLH  RTLT
Sbjct: 1159 LSPALRNRFTEIWVPAVIDVDELRSITFGRFTKTDFSCLGDCIVNFWKWFNQLHIGRTLT 1218

Query: 286  VRDLLSWVDFMNTTVTSFESPNYAFLHGAFLVLLDGLSLGTGISKHDAGKLREQCLSFLL 107
            +RDLLSW+ F+N T  +   P  A +HG FL+LLDGLSLG  +SK +A ++R  CLSFLL
Sbjct: 1219 IRDLLSWISFINVTEQNL-GPEQALIHGLFLILLDGLSLGLNVSKTEATEMRNTCLSFLL 1277

Query: 106  QSL-KSDIHSEDSQLSQLQTFGW 41
            + L K    + DS L+ L  +GW
Sbjct: 1278 EELQKVGGTAVDSYLNDLNNYGW 1300



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 9/165 (5%)
 Frame = -1

Query: 643  VDEISLADDSILERLNSVLEPEQKLSLAEKGGSMLENITAHPNFFLLATMNPGGDF-GKK 467
            +DE++LA   +LE LN +L+  ++L + E    + E I AHPNF L AT NP   + G+K
Sbjct: 714  LDELNLAPSDVLEALNRLLDDNRELFIPE----LQETIPAHPNFMLFATQNPPMLYGGRK 769

Query: 466  ELSPALRNRFTEIWVPPVSEMNELRSIALSFVGKSLSYTVDPMLKFWEWFSQLHTSRT-- 293
             LS A RNRF E+ V  + E +EL +I       + SY    +    E  +    SR   
Sbjct: 770  MLSRAFRNRFVEVHVDEIPE-DELATILEQRCRIAPSYAKRMVEVMKELQTHRQNSRVFA 828

Query: 292  -----LTVRDLLSWVDFMNTTVTSFESPNYAFL-HGAFLVLLDGL 176
                 +T RDL  W +   T    FE  +Y  L    +L+L + L
Sbjct: 829  GKHGFITPRDLFRWANRYRT----FEGKSYEDLAKDGYLLLAERL 869



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
 Frame = -1

Query: 643 VDEISLADDSILERLNSVLEPEQ-KLSLAEKGGSMLENITAHPNFFLLATMNPGGDFGKK 467
           +DE++LA    L+R+ +VL+ E+  L LAE+G   ++ +  HP F + A MNP  D GK+
Sbjct: 406 LDEVNLAPPETLQRIGAVLDGERGTLCLAERGD--VDYVERHPCFRIFACMNPATDAGKR 463

Query: 466 ELSPALRNRFTEIWVPPVSEMNELRSIALSFVG--KSLSYTVDPMLKFWE 323
           EL    RNRFTE +V  + + ++LR     ++    + +  +D +++F++
Sbjct: 464 ELPYTFRNRFTEYFVDDLMDDDDLRLFVRKYLDGLNAANGVIDSIVRFYK 513


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