BLASTX nr result

ID: Coptis24_contig00031804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031804
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]   198   2e-48
ref|XP_002510598.1| conserved hypothetical protein [Ricinus comm...   182   2e-43
ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|2...   179   8e-43
ref|XP_003545011.1| PREDICTED: uncharacterized protein At1g76070...   167   4e-39
ref|XP_003603835.1| Syringolide-induced protein 14-1-1 [Medicago...   164   3e-38

>emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]
          Length = 245

 Score =  198 bits (503), Expect = 2e-48
 Identities = 127/248 (51%), Positives = 152/248 (61%), Gaps = 20/248 (8%)
 Frame = -2

Query: 910 MEKTTKSKNKIFSFLPKTASV-SFHNP-PFSPGRDKR--TENLNKVKASNGGKGFSGPLR 743
           MEK  KSKN I  FLPK ASV +F N  PFSPGRD +  +++ NK KA   G+GFSGP+ 
Sbjct: 1   MEKPAKSKNMILKFLPKAASVINFQNSTPFSPGRDHKRSSDSTNKFKAHGAGRGFSGPMI 60

Query: 742 PPMIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPITXXXXXXXXXXX 563
             MIPVEA  +S+SG  FD QEPTSPK+SCMGQ+K K K     +K  +           
Sbjct: 61  S-MIPVEAHWRSRSGN-FDRQEPTSPKVSCMGQVKDKHKKRIPKTKRASPPKESKPREMK 118

Query: 562 XXXXSLRNIFSSAAKPGRKSDASAK-KPPLPDRAPSLCQMKQFTSGRDALADFDW----- 401
               +LR IF S+   GRKSDAS+  KP LPDRAPSL QMK+F+SGR+A ++FDW     
Sbjct: 119 KQHSTLRRIFRSS-NSGRKSDASSDDKPSLPDRAPSLGQMKRFSSGRNAFSNFDWTAPVA 177

Query: 400 -------KYY---XXXXXXXXXXEVFIAHSAPILIGSGSVGRVALEPRKEINLWKRRTMN 251
                   YY             E  I  SAPIL+G    G VALEPRKEINLWKRRT+ 
Sbjct: 178 PVDSDHRSYYSDEERGDFEEEDEEFIIPFSAPILVG----GAVALEPRKEINLWKRRTLV 233

Query: 250 PPKPLQLN 227
           PP+PL+LN
Sbjct: 234 PPRPLRLN 241


>ref|XP_002510598.1| conserved hypothetical protein [Ricinus communis]
           gi|223551299|gb|EEF52785.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score =  182 bits (461), Expect = 2e-43
 Identities = 123/269 (45%), Positives = 153/269 (56%), Gaps = 42/269 (15%)
 Frame = -2

Query: 907 EKTTKSKNKIFSFLPKTAS-VSFHNPPFSPGRDKRTENL-----NKVKASNGGKGFSGPL 746
           ++  K KNKI  FLPK AS VSF NPPFSPGRDKR         N+VK S+ GKG+SGP+
Sbjct: 6   QQAAKPKNKILKFLPKAASAVSFQNPPFSPGRDKRIPEYHQHFHNRVK-SHVGKGYSGPI 64

Query: 745 RPPMIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSK----------PIT 596
              +IP EAR ++    +F+  EPTSPKISCMGQIKHKKK  ++ SK            +
Sbjct: 65  -VSIIPDEARRRTSKNGSFENHEPTSPKISCMGQIKHKKKIINSSSKNKAKNQETEPEKS 123

Query: 595 XXXXXXXXXXXXXXXSLRNIFSSAAK----PGRKSDASA-KKPPLPD---RAPSLCQMKQ 440
                          +++ +FS+A K      R+SDAS   KPPL D   RAP+L Q+K+
Sbjct: 124 TSTSTPRREIKKHALTIKRMFSNAVKVPEHGRRRSDASMYDKPPLTDTSHRAPALSQLKR 183

Query: 439 FTSGRDALADFDW------------KYY------XXXXXXXXXXEVFIAHSAPILIGSGS 314
           F SGRD  A+FDW             YY                +V I  SAPI++G G 
Sbjct: 184 FASGRDTFANFDWTSQVVPAESDHRNYYSDDEEEERHSDHDYDEDVIIPFSAPIIVGPG- 242

Query: 313 VGRVALEPRKEINLWKRRTMNPPKPLQLN 227
           VG   L+PRKE+NLW+RRTMNPPKPLQLN
Sbjct: 243 VGN--LQPRKEVNLWRRRTMNPPKPLQLN 269


>ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|222843674|gb|EEE81221.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  179 bits (455), Expect = 8e-43
 Identities = 122/253 (48%), Positives = 147/253 (58%), Gaps = 26/253 (10%)
 Frame = -2

Query: 910 MEKTTKSK-NKIFSFLPKTAS-VSFHNPPFSPGRDKRTENLNKVKASNGGKGFSGPLRPP 737
           MEK   +  N+I  FLPK AS V+FHN  FSPGRD+R+E ++K KA N GKGF+ P R  
Sbjct: 1   MEKQAAAPPNRILKFLPKAASAVNFHNLAFSPGRDRRSEIIHKHKA-NVGKGFN-PCRS- 57

Query: 736 MIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPI-----TXXXXXXXX 572
           MIPVE R + K+      +EPTSPKISCMGQIKHKKK N A  K +     T        
Sbjct: 58  MIPVEVRRQPKNESFETQEEPTSPKISCMGQIKHKKKMNKATYKRVSLPQETKPASQTQR 117

Query: 571 XXXXXXXSLRNIFSSAAKPGRKSDA-SAKKPPLPDRAPSLCQMKQFTSGRDALADFDW-- 401
                   L+ +F + +K GRKS+A    KP LPDRAPSL QMK+F SGRD LA FDW  
Sbjct: 118 QVMKHASKLKRLF-TGSKAGRKSNAFDGGKPTLPDRAPSLSQMKRFASGRDTLASFDWTA 176

Query: 400 -----------KYY-----XXXXXXXXXXEVFIAHSAPILIGSGSVGRVALEPRKEINLW 269
                       YY               EV I  SAP+++G G    V L PRKE+NLW
Sbjct: 177 HQIAPVEPVGRDYYSDEERGDSFEDQEDEEVIIPFSAPMVLGGG----VDLLPRKEVNLW 232

Query: 268 KRRTMNPPKPLQL 230
           KRRTM+PP+PL+L
Sbjct: 233 KRRTMDPPEPLRL 245


>ref|XP_003545011.1| PREDICTED: uncharacterized protein At1g76070-like [Glycine max]
          Length = 246

 Score =  167 bits (423), Expect = 4e-39
 Identities = 107/246 (43%), Positives = 130/246 (52%), Gaps = 19/246 (7%)
 Frame = -2

Query: 907 EKTTKSKNKIFSFLPKTA----SVSFHNPPFSPGRDKRTENLNKVKASNGGKGFSGPLRP 740
           EK +K KNKIF  LPK A    S++F NPPFSPGRD + ++       +GGKGF      
Sbjct: 6   EKESKLKNKIFKILPKAAAAAVSMTFQNPPFSPGRDHKFKH-------HGGKGF---FSG 55

Query: 739 PMIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPITXXXXXXXXXXXX 560
           PMIPVEAR KSK G   + QEPTSPKISCMGQIKHKKK N       T            
Sbjct: 56  PMIPVEARRKSKDG-CVETQEPTSPKISCMGQIKHKKKKNQIKKAAKTMSMPTEEKKQAS 114

Query: 559 XXXSLRNIFSSAAK--PGRKSDASAKKPPLPDRAPSLCQMKQFTSGRDALADFDWK---- 398
               + +  S   K    RK  + A        AP L  M++F SGR+  ++FDWK    
Sbjct: 115 KFQRMMSFHSGKPKRPAARKQQSDADLESERSPAPPLGHMRRFASGRETFSNFDWKAQIA 174

Query: 397 --------YYXXXXXXXXXXEVFIAHSAPILIG-SGSVGRVALEPRKEINLWKRRTMNPP 245
                   YY          E+ I  SAP+ +G + S   +  +PRKEINLWKRRTM PP
Sbjct: 175 PEERDCYSYYDDRLESDAEDEIIIPFSAPLTVGGAASALNLNAQPRKEINLWKRRTMAPP 234

Query: 244 KPLQLN 227
           +PLQLN
Sbjct: 235 RPLQLN 240


>ref|XP_003603835.1| Syringolide-induced protein 14-1-1 [Medicago truncatula]
           gi|355492883|gb|AES74086.1| Syringolide-induced protein
           14-1-1 [Medicago truncatula]
          Length = 245

 Score =  164 bits (416), Expect = 3e-38
 Identities = 112/250 (44%), Positives = 141/250 (56%), Gaps = 22/250 (8%)
 Frame = -2

Query: 910 MEKTTKSKNKIFSFLPKTASVSFHNPPFSPGRD--KRTENLNKVKASNGGKGFSGPLRPP 737
           MEK  K +NKI   LPKT +++F N PFSPGRD   R +N  K    +G KGFSGP++  
Sbjct: 1   MEKNLKLRNKILKILPKTITINFQNHPFSPGRDHKSRQDNATKWARPHGVKGFSGPIQS- 59

Query: 736 MIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPITXXXXXXXXXXXXX 557
           +IP EAR KSK     D +EPTSPKISCMGQIKHKKK     SK +              
Sbjct: 60  IIPREARRKSKDINGIDYEEPTSPKISCMGQIKHKKKQIKK-SKDMEVKKHVNTFQKM-- 116

Query: 556 XXSLRNIFSSAAKPGRKSDASA---KKPPLPDRAPSLCQMKQFTSGRDALADFDWK---- 398
              L ++    ++  RKSDA A   KK  + +RA  + QMK+F SGRD  A+FDWK    
Sbjct: 117 ---LFHVGKPKSEGRRKSDACAVQDKKYAIEERATHVSQMKRFASGRDTFANFDWKAQVA 173

Query: 397 ------YYXXXXXXXXXXE-----VFIAHSAPIL--IGSGSVGRVALEPRKEINLWKRRT 257
                 YY          +       I  SAP+   +G+ S+G + L+PRKEINLWKRRT
Sbjct: 174 PEEIDNYYSDEERMQSDDDDDEEEFKIPFSAPLGGGVGACSLG-LDLKPRKEINLWKRRT 232

Query: 256 MNPPKPLQLN 227
           M PP+PLQL+
Sbjct: 233 MAPPRPLQLD 242


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