BLASTX nr result

ID: Coptis24_contig00031803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031803
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335975.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002518510.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
emb|CBI23190.3| unnamed protein product [Vitis vinifera]              110   1e-22
emb|CAN68639.1| hypothetical protein VITISV_030806 [Vitis vinifera]   110   1e-22
ref|XP_002305591.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22

>ref|XP_002335975.1| predicted protein [Populus trichocarpa] gi|222836541|gb|EEE74948.1|
            predicted protein [Populus trichocarpa]
          Length = 1319

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1    FEIGDEDADDEEVEPSSPVSDWEDSDLEKGGEHSYG-WVDEEEELSKFVSHLYDALFREG 177
            FEIG+E+A++EE EP+SPVSDWEDSD EK G+HS G W D+EEELS+FV  LYD LFR G
Sbjct: 1233 FEIGEEEAEEEEAEPTSPVSDWEDSDPEKNGDHSIGFWDDDEEELSQFVCKLYDLLFRVG 1292

Query: 178  ARVDVALQHALHLHPKLRYSC 240
            ARVD ALQ+AL LH +LRYSC
Sbjct: 1293 ARVDAALQNALALHQRLRYSC 1313


>ref|XP_002518510.1| conserved hypothetical protein [Ricinus communis]
            gi|223542355|gb|EEF43897.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1318

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1    FEIGDEDADDEEVEPSSPVSDWEDSDLEKGGEHSYG-WVDEEEELSKFVSHLYDALFREG 177
            FEIG+E+A+DEE EP SP SDWEDSDLEK GE + G W DEE+ELS+FV HLYD++F+EG
Sbjct: 1232 FEIGEEEAEDEEAEPVSPRSDWEDSDLEKNGERATGFWDDEEDELSQFVCHLYDSIFQEG 1291

Query: 178  ARVDVALQHALHLHPKLRYSC 240
            A+VD AL++AL  H +LRYSC
Sbjct: 1292 AKVDAALRNALASHRRLRYSC 1312


>emb|CBI23190.3| unnamed protein product [Vitis vinifera]
          Length = 1286

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1    FEIGDEDADDEEVEPSSPVSDWEDSDLEKGGEHSYG-WVDEEEELSKFVSHLYDALFREG 177
            FEIG+E+A+DEE E S+PVSDWEDSD EK GE+    W D+E ELS+F+  LYD+LFREG
Sbjct: 1200 FEIGEEEAEDEEAELSTPVSDWEDSDAEKNGENFMQFWDDDEAELSQFICQLYDSLFREG 1259

Query: 178  ARVDVALQHALHLHPKLRYSC 240
            + VD ALQHAL  H KLRYSC
Sbjct: 1260 STVDDALQHALAAHRKLRYSC 1280


>emb|CAN68639.1| hypothetical protein VITISV_030806 [Vitis vinifera]
          Length = 1286

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1    FEIGDEDADDEEVEPSSPVSDWEDSDLEKGGEHSYG-WVDEEEELSKFVSHLYDALFREG 177
            FEIG+E+A+DEE E S+PVSDWEDSD EK GE+    W D+E ELS+F+  LYD+LFREG
Sbjct: 1200 FEIGEEEAEDEEAELSTPVSDWEDSDAEKNGENFMQFWDDDEAELSQFICQLYDSLFREG 1259

Query: 178  ARVDVALQHALHLHPKLRYSC 240
            + VD ALQHAL  H KLRYSC
Sbjct: 1260 STVDDALQHALAAHRKLRYSC 1280


>ref|XP_002305591.1| predicted protein [Populus trichocarpa] gi|222848555|gb|EEE86102.1|
            predicted protein [Populus trichocarpa]
          Length = 1276

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/83 (63%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
 Frame = +1

Query: 1    FEIGDEDADDEE--VEPSSPVSDWEDSDLEKGGEHSYG-WVDEEEELSKFVSHLYDALFR 171
            FEIG+E+A++EE   EP+SPVSDWEDSD EK G+ S G W D+EE+LS+F+  LYD+LF+
Sbjct: 1188 FEIGEEEAEEEEEEAEPTSPVSDWEDSDAEKHGDRSIGFWDDDEEDLSQFICKLYDSLFQ 1247

Query: 172  EGARVDVALQHALHLHPKLRYSC 240
            EGARVD ALQ+AL  H + RYSC
Sbjct: 1248 EGARVDAALQNALASHRRQRYSC 1270


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