BLASTX nr result

ID: Coptis24_contig00031796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031796
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66950.1| hypothetical protein VITISV_020097 [Vitis vinifera]    54   1e-14
ref|XP_002516496.1| 9-cis-epoxycarotenoid dioxygenase, putative ...    53   6e-14
emb|CBI20860.3| unnamed protein product [Vitis vinifera]               54   1e-13
emb|CAN66948.1| hypothetical protein VITISV_020095 [Vitis vinifera]    53   2e-13
ref|XP_002281333.2| PREDICTED: carotenoid 9,10(9',10')-cleavage ...    50   2e-12

>emb|CAN66950.1| hypothetical protein VITISV_020097 [Vitis vinifera]
          Length = 1199

 Score = 54.3 bits (129), Expect(2) = 1e-14
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = +3

Query: 111  LTKLYLEELSTRQSEMKEHSPSEELIKVEYHKFEDNNFCSGAAFVSKHGSHDE 269
            L KLY EE    ++         +LIKVEYH+FE+NNFCSG+AFV K G  +E
Sbjct: 1093 LAKLYFEEQD--KTPPARDGKKGQLIKVEYHRFEENNFCSGSAFVPKQGGVEE 1143



 Score = 49.7 bits (117), Expect(2) = 1e-14
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = +2

Query: 5    ANGDLEVGELFSRIYEWRLNMRNGETKEKYLTGTSF 112
            +NG  + G LF+++YEWRLNM  GE KE+ LTGT F
Sbjct: 1018 SNGFTQEGFLFAQVYEWRLNMETGEVKERNLTGTDF 1053


>ref|XP_002516496.1| 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
           gi|223544316|gb|EEF45837.1| 9-cis-epoxycarotenoid
           dioxygenase, putative [Ricinus communis]
          Length = 577

 Score = 52.8 bits (125), Expect(2) = 6e-14
 Identities = 24/35 (68%), Positives = 26/35 (74%)
 Frame = +2

Query: 8   NGDLEVGELFSRIYEWRLNMRNGETKEKYLTGTSF 112
           N   EVG  FSR +EWRLNM+ GE KEKYLTGT F
Sbjct: 401 NSSNEVGLSFSRCHEWRLNMQTGEVKEKYLTGTEF 435



 Score = 49.3 bits (116), Expect(2) = 6e-14
 Identities = 27/53 (50%), Positives = 31/53 (58%)
 Frame = +3

Query: 111 LTKLYLEELSTRQSEMKEHSPSEELIKVEYHKFEDNNFCSGAAFVSKHGSHDE 269
           L KLY EE   +          +E+IKVEYHKFE N FC+GAAFV K  S  E
Sbjct: 475 LAKLYFEEGENK---------FDEVIKVEYHKFEKNTFCTGAAFVPKTASTPE 518


>emb|CBI20860.3| unnamed protein product [Vitis vinifera]
          Length = 567

 Score = 54.3 bits (129), Expect(2) = 1e-13
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = +3

Query: 111 LTKLYLEELSTRQSEMKEHSPSEELIKVEYHKFEDNNFCSGAAFVSKHGSHDE 269
           L KLY EE  ++ S +KE    E LIKVEY++F +NNFCSG+ FV K GS +E
Sbjct: 461 LAKLYFEESDSKLS-VKE-GKGEHLIKVEYNRFAENNFCSGSVFVPKGGSSEE 511



 Score = 46.6 bits (109), Expect(2) = 1e-13
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = +2

Query: 5   ANGDLEVGELFSRIYEWRLNMRNGETKEKYLTGTSF 112
           + G  + G LF+R+ EWRLNM  GE KE+ LTGT F
Sbjct: 386 STGSTQEGFLFARVCEWRLNMETGEVKERNLTGTDF 421


>emb|CAN66948.1| hypothetical protein VITISV_020095 [Vitis vinifera]
          Length = 915

 Score = 53.1 bits (126), Expect(2) = 2e-13
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
 Frame = +3

Query: 111 LTKLYLEELSTRQS-----EMKEHSPSEELIKVEYHKFEDNNFCSGAAFVSKHGSHDE 269
           L KLY EE  ++ S       ++    E LIKVEY++F +NNFCSG+ FV K GS +E
Sbjct: 409 LAKLYFEESDSKLSVGFCLTKQKEGKGEHLIKVEYNRFAENNFCSGSVFVPKGGSSEE 466



 Score = 47.0 bits (110), Expect(2) = 2e-13
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = +2

Query: 5   ANGDLEVGELFSRIYEWRLNMRNGETKEKYLTGTSF 112
           + G  + G LF+R+ EWRLNM  GE KE+ LTGT F
Sbjct: 334 STGSTQEGYLFARVCEWRLNMETGEVKERNLTGTDF 369


>ref|XP_002281333.2| PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like
           [Vitis vinifera]
          Length = 597

 Score = 50.1 bits (118), Expect(2) = 2e-12
 Identities = 26/53 (49%), Positives = 33/53 (62%)
 Frame = +3

Query: 111 LTKLYLEELSTRQSEMKEHSPSEELIKVEYHKFEDNNFCSGAAFVSKHGSHDE 269
           L KLY EE  ++ S          LIKVEY++F +NNFCSG+ FV K GS +E
Sbjct: 498 LAKLYFEESDSKLSH---------LIKVEYNRFAENNFCSGSVFVPKGGSSEE 541



 Score = 46.6 bits (109), Expect(2) = 2e-12
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = +2

Query: 5   ANGDLEVGELFSRIYEWRLNMRNGETKEKYLTGTSF 112
           + G  + G LF+R+ EWRLNM  GE KE+ LTGT F
Sbjct: 423 STGSTQEGFLFARVCEWRLNMETGEVKERNLTGTDF 458


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