BLASTX nr result
ID: Coptis24_contig00031787
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031787 (309 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum] 108 6e-22 ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 107 8e-22 ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 105 3e-21 ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 102 4e-20 emb|CBI17843.3| unnamed protein product [Vitis vinifera] 99 5e-19 >gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum] Length = 739 Score = 108 bits (269), Expect = 6e-22 Identities = 52/81 (64%), Positives = 65/81 (80%) Frame = -2 Query: 278 TSGPGYVLDPSKCSKLSMDEKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIK 99 +S G LDPSKCSKLSM+EKR+L+YE+SK PEML+SWSRQE+ Q+LCAE GKE K Sbjct: 4 SSFEGIALDPSKCSKLSMEEKRELVYELSKQSHGAPEMLQSWSRQEILQILCAEMGKERK 63 Query: 98 KTCLTKMKIIERLMRVVSKNK 36 T LTK+KIIE L+++VS+ K Sbjct: 64 YTGLTKLKIIENLLKIVSEKK 84 >ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max] Length = 737 Score = 107 bits (268), Expect = 8e-22 Identities = 52/85 (61%), Positives = 66/85 (77%) Frame = -2 Query: 290 LALSTSGPGYVLDPSKCSKLSMDEKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETG 111 +A +S G LDPSKCSKLSM+EKR+L+YE+SK EML+SWSRQE+ Q+LCAE G Sbjct: 1 MATDSSFEGLALDPSKCSKLSMEEKRELVYEVSKWSHGASEMLQSWSRQEILQILCAEMG 60 Query: 110 KEIKKTCLTKMKIIERLMRVVSKNK 36 KE K T LTK+KIIE L+++VS+ K Sbjct: 61 KERKYTGLTKLKIIENLLKIVSEKK 85 >ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max] Length = 736 Score = 105 bits (263), Expect = 3e-21 Identities = 51/85 (60%), Positives = 65/85 (76%) Frame = -2 Query: 290 LALSTSGPGYVLDPSKCSKLSMDEKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETG 111 +A +S G LDPSKCSKLSM+EKR+L+YE+S EML+SWSRQE+ Q+LCAE G Sbjct: 1 MATDSSFEGLALDPSKCSKLSMEEKRELVYEVSNWSHGASEMLQSWSRQEILQILCAEMG 60 Query: 110 KEIKKTCLTKMKIIERLMRVVSKNK 36 KE K T LTK+KIIE L+++VS+ K Sbjct: 61 KERKYTGLTKLKIIENLLKIVSEKK 85 >ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera] Length = 738 Score = 102 bits (253), Expect = 4e-20 Identities = 50/81 (61%), Positives = 63/81 (77%) Frame = -2 Query: 284 LSTSGPGYVLDPSKCSKLSMDEKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKE 105 + +S G V DPSK +KLSM+EKR+L+Y +SK PEML+SWSRQE+ Q+LCAE GKE Sbjct: 1 MDSSSEGIVYDPSKINKLSMEEKRELVYAVSKWSRGGPEMLQSWSRQEILQILCAEMGKE 60 Query: 104 IKKTCLTKMKIIERLMRVVSK 42 K T LTK+KIIE L+RVVS+ Sbjct: 61 RKYTGLTKLKIIEHLLRVVSE 81 >emb|CBI17843.3| unnamed protein product [Vitis vinifera] Length = 652 Score = 98.6 bits (244), Expect = 5e-19 Identities = 48/78 (61%), Positives = 60/78 (76%) Frame = -2 Query: 284 LSTSGPGYVLDPSKCSKLSMDEKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKE 105 + +S G V DPSK +KLSM+EKR+L+Y +SK PEML+SWSRQE+ Q+LCAE GKE Sbjct: 1 MDSSSEGIVYDPSKINKLSMEEKRELVYAVSKWSRGGPEMLQSWSRQEILQILCAEMGKE 60 Query: 104 IKKTCLTKMKIIERLMRV 51 K T LTK+KIIE L+RV Sbjct: 61 RKYTGLTKLKIIEHLLRV 78