BLASTX nr result

ID: Coptis24_contig00031768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031768
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535833.1| PREDICTED: ABC transporter G family member 2...   247   8e-64
ref|XP_003519092.1| PREDICTED: ABC transporter G family member 2...   247   8e-64
emb|CBI39105.3| unnamed protein product [Vitis vinifera]              242   2e-62
ref|XP_002322764.1| white-brown-complex ABC transporter family [...   242   3e-62
ref|XP_003553629.1| PREDICTED: ABC transporter G family member 2...   240   8e-62

>ref|XP_003535833.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 738

 Score =  247 bits (630), Expect = 8e-64
 Identities = 126/155 (81%), Positives = 132/155 (85%)
 Frame = +2

Query: 5   EKDILHGITGSVSPGEVLALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKTLK 184
           EKDIL+GITGSV+PGEVLALMGPSGSGKTTLLNLLGGRL   + GGSITYNDQPYSK LK
Sbjct: 161 EKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLK 220

Query: 185 RRIGFVTQDDVLFPHLTVREXXXXXXXXXXXXXXXXQQKEERALDVICELGLERCQDTMI 364
            RIGFVTQDDVLFPHLTV+E                +QKE+RALDVI ELGLERCQDTMI
Sbjct: 221 SRIGFVTQDDVLFPHLTVKETLTYAARLRLPKAYTKEQKEKRALDVIYELGLERCQDTMI 280

Query: 365 GGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT 469
           GGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT
Sbjct: 281 GGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT 315


>ref|XP_003519092.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 743

 Score =  247 bits (630), Expect = 8e-64
 Identities = 126/155 (81%), Positives = 132/155 (85%)
 Frame = +2

Query: 5   EKDILHGITGSVSPGEVLALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKTLK 184
           EKDIL+GITGSV+PGEVLALMGPSGSGKTTLLNLLGGRL   + GGSITYNDQPYSK LK
Sbjct: 166 EKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLK 225

Query: 185 RRIGFVTQDDVLFPHLTVREXXXXXXXXXXXXXXXXQQKEERALDVICELGLERCQDTMI 364
            RIGFVTQDDVLFPHLTV+E                +QKE+RALDVI ELGLERCQDTMI
Sbjct: 226 SRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTYTKEQKEKRALDVIYELGLERCQDTMI 285

Query: 365 GGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT 469
           GGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT
Sbjct: 286 GGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT 320


>emb|CBI39105.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  242 bits (618), Expect = 2e-62
 Identities = 123/156 (78%), Positives = 134/156 (85%)
 Frame = +2

Query: 2   VEKDILHGITGSVSPGEVLALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKTL 181
           VEK+IL+GITGSV+PGEVLALMGPSGSGKTTLLNLLGGRL++   GGS+TYNDQPYSK+L
Sbjct: 160 VEKEILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLNQPTAGGSVTYNDQPYSKSL 219

Query: 182 KRRIGFVTQDDVLFPHLTVREXXXXXXXXXXXXXXXXQQKEERALDVICELGLERCQDTM 361
           K +IGFVTQDDVLFPHLTVRE                QQKE+RA+DVI ELGL+RCQDTM
Sbjct: 220 KSKIGFVTQDDVLFPHLTVRETLTYAARLRLPKTLTKQQKEKRAVDVIYELGLDRCQDTM 279

Query: 362 IGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT 469
           IGGSFVRGVSGGERKRV IGNEIIINPSLLFLDEPT
Sbjct: 280 IGGSFVRGVSGGERKRVSIGNEIIINPSLLFLDEPT 315


>ref|XP_002322764.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222867394|gb|EEF04525.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 744

 Score =  242 bits (617), Expect = 3e-62
 Identities = 121/155 (78%), Positives = 133/155 (85%)
 Frame = +2

Query: 5   EKDILHGITGSVSPGEVLALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKTLK 184
           EKDIL+GI+GSV PGEVLALMGPSGSGKTTLLNL+GGRL+++  GGS+TYNDQPYSK LK
Sbjct: 169 EKDILYGISGSVDPGEVLALMGPSGSGKTTLLNLIGGRLNQTTVGGSLTYNDQPYSKFLK 228

Query: 185 RRIGFVTQDDVLFPHLTVREXXXXXXXXXXXXXXXXQQKEERALDVICELGLERCQDTMI 364
            RIGFVTQDDVLFPHLTV+E                +QK++RA+DVI ELGLERCQDTMI
Sbjct: 229 SRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTLTKEQKQKRAIDVIYELGLERCQDTMI 288

Query: 365 GGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT 469
           GGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT
Sbjct: 289 GGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT 323


>ref|XP_003553629.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 736

 Score =  240 bits (613), Expect = 8e-62
 Identities = 123/155 (79%), Positives = 132/155 (85%)
 Frame = +2

Query: 5   EKDILHGITGSVSPGEVLALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKTLK 184
           EKDIL GITGSV+PGEVLALMGPSGSGKT+LLNLLGGRL +S  GGSITYNDQPYSK LK
Sbjct: 159 EKDILKGITGSVNPGEVLALMGPSGSGKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLK 218

Query: 185 RRIGFVTQDDVLFPHLTVREXXXXXXXXXXXXXXXXQQKEERALDVICELGLERCQDTMI 364
            RIGFVTQDDVLFPHLTV+E                +QKE+RAL+VI ELGLERCQDTMI
Sbjct: 219 SRIGFVTQDDVLFPHLTVKETLTYAARLRLPNTLTKEQKEKRALEVIDELGLERCQDTMI 278

Query: 365 GGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT 469
           GGS+VRG+SGGERKRVCIGNEIIINPSLLFLDEPT
Sbjct: 279 GGSYVRGISGGERKRVCIGNEIIINPSLLFLDEPT 313


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