BLASTX nr result

ID: Coptis24_contig00031766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031766
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...    65   8e-09
ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
           gi|297740652|emb|CBI30834.3| unnamed protein product
           [Vitis vinifera]
          Length = 1011

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   TDARIKVAAQEKIHVXXXXXXXXXXXXXXXXXGVTEGID-EKNIVSNKDNGSFNSLSKEL 178
           T+ARIKVAAQEKIHV                 GVTEG   + +   NK     +SL KEL
Sbjct: 195 TNARIKVAAQEKIHVEILEEQLVNLRNELSHRGVTEGSGADMHENWNKAFDGVHSLGKEL 254

Query: 179 RLLRKENMSLKDDIRVLQEQLSNV 250
            LLR EN+SLKDDI  L+E+LS+V
Sbjct: 255 SLLRTENVSLKDDILALKEELSHV 278


>ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|222845772|gb|EEE83319.1|
           predicted protein [Populus trichocarpa]
          Length = 887

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 37/82 (45%), Positives = 47/82 (57%)
 Frame = +2

Query: 5   DARIKVAAQEKIHVXXXXXXXXXXXXXXXXXGVTEGIDEKNIVSNKDNGSFNSLSKELRL 184
           DA++KVAAQEKI V                 G TE    +++V        +SLS+EL L
Sbjct: 85  DAKMKVAAQEKIRVELLEAQLEKLRNELAQRGATE----RSVV--------HSLSEELSL 132

Query: 185 LRKENMSLKDDIRVLQEQLSNV 250
           LR ENMSLK+DI  L+E+LSNV
Sbjct: 133 LRSENMSLKNDIEALREELSNV 154


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