BLASTX nr result
ID: Coptis24_contig00031766
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031766 (253 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257... 65 8e-09 ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|2... 56 4e-06 >ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera] gi|297740652|emb|CBI30834.3| unnamed protein product [Vitis vinifera] Length = 1011 Score = 64.7 bits (156), Expect = 8e-09 Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Frame = +2 Query: 2 TDARIKVAAQEKIHVXXXXXXXXXXXXXXXXXGVTEGID-EKNIVSNKDNGSFNSLSKEL 178 T+ARIKVAAQEKIHV GVTEG + + NK +SL KEL Sbjct: 195 TNARIKVAAQEKIHVEILEEQLVNLRNELSHRGVTEGSGADMHENWNKAFDGVHSLGKEL 254 Query: 179 RLLRKENMSLKDDIRVLQEQLSNV 250 LLR EN+SLKDDI L+E+LS+V Sbjct: 255 SLLRTENVSLKDDILALKEELSHV 278 >ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|222845772|gb|EEE83319.1| predicted protein [Populus trichocarpa] Length = 887 Score = 55.8 bits (133), Expect = 4e-06 Identities = 37/82 (45%), Positives = 47/82 (57%) Frame = +2 Query: 5 DARIKVAAQEKIHVXXXXXXXXXXXXXXXXXGVTEGIDEKNIVSNKDNGSFNSLSKELRL 184 DA++KVAAQEKI V G TE +++V +SLS+EL L Sbjct: 85 DAKMKVAAQEKIRVELLEAQLEKLRNELAQRGATE----RSVV--------HSLSEELSL 132 Query: 185 LRKENMSLKDDIRVLQEQLSNV 250 LR ENMSLK+DI L+E+LSNV Sbjct: 133 LRSENMSLKNDIEALREELSNV 154