BLASTX nr result
ID: Coptis24_contig00031756
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031756 (554 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 82 6e-14 gb|ABF70109.1| ubiquitin ligase SINAT5-related (seven in absenti... 79 4e-13 gb|AEQ94181.1| ubiquitin ligase SINAT3 [Elaeis guineensis] 79 6e-13 ref|XP_002320867.1| predicted protein [Populus trichocarpa] gi|2... 79 6e-13 ref|XP_004168590.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 78 8e-13 >ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera] gi|297742353|emb|CBI34502.3| unnamed protein product [Vitis vinifera] Length = 316 Score = 82.0 bits (201), Expect = 6e-14 Identities = 53/100 (53%), Positives = 61/100 (61%), Gaps = 6/100 (6%) Frame = +3 Query: 3 VFNCSGQYFSLHLE-FQRCMGAV*NAFMLTHGAQLGTRNSNYGLAVREN---ILLEGIPR 170 VFNC GQYF LH E FQ M V AF+ G ++ RN +Y L V N ++ EG PR Sbjct: 197 VFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEIEARNFSYSLEVGANGRKLIWEGTPR 256 Query: 171 SICD--KRGRDRHDGLTIQCNIDLLFSGIYRKELKLWVIG 284 SI D K+ RD HDGL IQ N+ L FSG RKELKL V G Sbjct: 257 SIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG 296 >gb|ABF70109.1| ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] Length = 301 Score = 79.3 bits (194), Expect = 4e-13 Identities = 52/100 (52%), Positives = 60/100 (60%), Gaps = 6/100 (6%) Frame = +3 Query: 3 VFNCSGQYFSLHLE-FQRCMGAV*NAFMLTHGAQLGTRNSNYGLAVREN---ILLEGIPR 170 VFNC GQYF LH E FQ M V AF+ G + RN +Y L V N ++ EG PR Sbjct: 182 VFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNFSYSLEVGANGRKLIWEGTPR 241 Query: 171 SICD--KRGRDRHDGLTIQCNIDLLFSGIYRKELKLWVIG 284 SI D ++ RD HDGL IQ N+ L FSG RKELKL V G Sbjct: 242 SIRDTHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTG 281 >gb|AEQ94181.1| ubiquitin ligase SINAT3 [Elaeis guineensis] Length = 196 Score = 78.6 bits (192), Expect = 6e-13 Identities = 51/100 (51%), Positives = 60/100 (60%), Gaps = 6/100 (6%) Frame = +3 Query: 3 VFNCSGQYFSLHLE-FQRCMGAV*NAFMLTHGAQLGTRNSNYGLAVREN---ILLEGIPR 170 VFNC GQYF LH E FQ M V AF+ G + RN +Y L V N ++ EG PR Sbjct: 77 VFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNFSYSLEVGANGRKLIWEGTPR 136 Query: 171 SICD--KRGRDRHDGLTIQCNIDLLFSGIYRKELKLWVIG 284 SI D ++ RD HDGL IQ N+ L FSG RKELKL + G Sbjct: 137 SIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRITG 176 >ref|XP_002320867.1| predicted protein [Populus trichocarpa] gi|222861640|gb|EEE99182.1| predicted protein [Populus trichocarpa] Length = 330 Score = 78.6 bits (192), Expect = 6e-13 Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 6/100 (6%) Frame = +3 Query: 3 VFNCSGQYFSLHLE-FQRCMGAV*NAFMLTHGAQLGTRNSNYGLAVREN---ILLEGIPR 170 VF+C GQYF LH E FQ M V AF+ G + RN +Y L V N ++ EG+PR Sbjct: 211 VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYSYSLEVGGNGRKLIWEGMPR 270 Query: 171 SICD--KRGRDRHDGLTIQCNIDLLFSGIYRKELKLWVIG 284 SI D ++ RD HDGL IQ N+ L FSG RKELKL V G Sbjct: 271 SIRDSHRKVRDSHDGLVIQRNMALFFSGGDRKELKLRVTG 310 >ref|XP_004168590.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINAT3-like [Cucumis sativus] Length = 304 Score = 78.2 bits (191), Expect = 8e-13 Identities = 51/100 (51%), Positives = 60/100 (60%), Gaps = 6/100 (6%) Frame = +3 Query: 3 VFNCSGQYFSLHLE-FQRCMGAV*NAFMLTHGAQLGTRNSNYGLAVREN---ILLEGIPR 170 VF+C GQYF LH E FQ M V AF+ G + RN +Y L V N ++ EG PR Sbjct: 196 VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWEGNPR 255 Query: 171 SICD--KRGRDRHDGLTIQCNIDLLFSGIYRKELKLWVIG 284 SI D K+ RD HDGL IQ N+ L FSG RKELKL + G Sbjct: 256 SIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITG 295