BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031743
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    86   3e-15
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 85   7e-15
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   1e-14
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  114 bits (285), Expect = 1e-23
 Identities = 64/182 (35%), Positives = 95/182 (52%), Gaps = 4/182 (2%)
 Frame = -3

Query: 536 KEQGGLGMIDARTWNKAAYCGLIFRLAA-KDGSLWSNWTWSQHIKHSFFWTMKIPASCSW 360
           K++GGLG+   + WNK A    I+ L    DGS+WS W  S  ++   FWT+K P +CSW
Sbjct: 156 KKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSW 215

Query: 359 VWRGILKHRNIARKHVRYVIADGTDTLFWHDPWCSGQPLWESSVAR--HSFALPKDAKVS 186
            W  ILK R++A   ++Y+I DG  T  W D W    PL +S   R  +   + K+AKV+
Sbjct: 216 AWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVN 275

Query: 185 DILSQGNWSS-MVESISDSSLKNRILNTEVNCYLDKDEVIWTASSTGEFSVKSAYAVLRK 9
            ++    W +   ++I    +   I +        KDE++W  S    FSVK A+  LR+
Sbjct: 276 VLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRR 335

Query: 8   ER 3
            R
Sbjct: 336 HR 337


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
 Frame = -3

Query: 536  KEQGGLGMIDARTWNKAAYCGLIFRLAAKDGSLWSNWTWSQHIKHSFFWTMKIPASCSWV 357
            K +GGLG+ +  TWNK     LI+ L A+  SLW  W  +  ++H  FW  +  +  SW+
Sbjct: 861  KAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFWNAEAASHHSWI 920

Query: 356  WRGILKHRNIARKHVRYVIADGTDTLFWHDPWCSGQPLWESSVAR--HSFALPKDAKVSD 183
            W+ IL  R +A++ +R  + +G    +W+D W +  PL E+  A       + + A V++
Sbjct: 921  WKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWSNLGPLIEAIGASGPQLTGIHESAVVTE 980

Query: 182  ILSQGNW---SSMVESISDSSLKNRILNTEVNCYLDKDEVIWT----ASSTGEFSVKSAY 24
              S   W   S+   + S ++L++ +LN+      D+ E  +T     SS+  FS K  +
Sbjct: 981  ASSSTGWILPSARTRNASLANLRSTLLNSPAPSG-DRGEDTYTWYIEGSSSTSFSSKLTW 1039

Query: 23   AVLRK 9
              LR+
Sbjct: 1040 ECLRQ 1044


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
 Frame = -3

Query: 539 LKEQGGLGMIDARTWNKAAYCGLIFRLAAKDGSLWSNWTWSQHIKHSFFWTMKIPASC-S 363
           LK++GGLG+      NK +   LI+RL ++  SLW NW W+  I+   FW+    +S  S
Sbjct: 441 LKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGS 500

Query: 362 WVWRGILKHRNIARKHVRYVIADGTDTLFWHDPWCSGQPLWESSVARHS--FALPKDAKV 189
           W+W+ +LK+R++A+   +  I  G+ T FW+D W     L + + AR +    +P  A V
Sbjct: 501 WMWKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNWSQLGQLVDVTNARRTIDMGIPLAATV 560

Query: 188 SDILS 174
           + +L+
Sbjct: 561 ATVLA 565


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 2/178 (1%)
 Frame = -3

Query: 536  KEQGGLGMIDARTWNKAAYCGLIFRLAAKDGSLWSNWTWSQHIKHSFFWTMKIPASCSWV 357
            K  GG+G   A   N A    L++++     ++W      +++K       KIP++ SW 
Sbjct: 864  KSVGGVGFRKAEVTNIALQMKLLWKIMVSKDNIWVKLVTQKYLKEQNLLVCKIPSNASWQ 923

Query: 356  WRGILKHRNIARKHVRYVIADGTDTLFWHDPWCSGQPLWESSVARHSFALPKDAKVSDIL 177
            W+ +L+HRN   K +R++I DG D  FW D W    PL    V        ++ KV++  
Sbjct: 924  WKNLLRHRNFFSKGLRWLIGDGQDISFWTDNWIFQYPLNSKYVPTVG---SENIKVAECF 980

Query: 176  S-QGNWS-SMVESISDSSLKNRILNTEVNCYLDKDEVIWTASSTGEFSVKSAYAVLRK 9
            +  G W    + ++   ++   I +  +     +D ++W  + TG++SVKS  +++R+
Sbjct: 981  NGLGGWDIPKLLTLVPPNIVKAISSVFIPSSSQQDRLLWGLTPTGQYSVKSGASLIRE 1038


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
 Frame = -3

Query: 395 FWTMKIPASCSWVWRGILKHRNIARKHVRYVIADGTDTLFWHDPWCSGQPLWESSVAR-- 222
           FWT+K P +CSW W  ILK R++A   ++Y+I DG  T  W D W    PL +S   R  
Sbjct: 22  FWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 81

Query: 221 HSFALPKDAKVSDILSQGNWSS-MVESISDSSLKNRILNTEVNCYLDKDEVIWTASSTGE 45
           +   + K+AKV+ ++    W +   ++I    +   I +        KDE++W  S    
Sbjct: 82  YDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHR 141

Query: 44  FSVKSAYAVLRKER 3
           FSVK A+  LR+ R
Sbjct: 142 FSVKVAWEQLRRHR 155