BLASTX nr result

ID: Coptis24_contig00031740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031740
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifer...   110   2e-22
emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera]   110   2e-22
ref|NP_001237022.1| uncharacterized protein LOC100305555 precurs...   109   3e-22
ref|XP_002304730.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002332055.1| predicted protein [Populus trichocarpa] gi|1...   103   1e-20

>ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifera]
           gi|298204685|emb|CBI25183.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/70 (72%), Positives = 58/70 (82%)
 Frame = +1

Query: 1   NCTTEGATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGL 180
           NCTT+ ATGNW+SGKDFI LD+AKRYYFICGNGGCFSGMKVSVLVH LP+PP+A+  A  
Sbjct: 73  NCTTDSATGNWSSGKDFILLDKAKRYYFICGNGGCFSGMKVSVLVHPLPTPPSASTAAAE 132

Query: 181 RSDKSVAATR 210
            S  + AA R
Sbjct: 133 ISKPNSAAAR 142


>emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera]
          Length = 168

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/70 (72%), Positives = 58/70 (82%)
 Frame = +1

Query: 1   NCTTEGATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGL 180
           NCTT+ ATGNW+SGKDFI LD+AKRYYFICGNGGCFSGMKVSVLVH LP+PP+A+  A  
Sbjct: 73  NCTTDSATGNWSSGKDFILLDKAKRYYFICGNGGCFSGMKVSVLVHPLPTPPSASTAAAE 132

Query: 181 RSDKSVAATR 210
            S  + AA R
Sbjct: 133 ISKPNSAAAR 142


>ref|NP_001237022.1| uncharacterized protein LOC100305555 precursor [Glycine max]
           gi|255625899|gb|ACU13294.1| unknown [Glycine max]
          Length = 170

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/67 (74%), Positives = 56/67 (83%)
 Frame = +1

Query: 1   NCTTEGATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGL 180
           NCTTEGA GNW+SGKDFIPL++AKRYYFICGNG CFSGMKVSV+VH LP PPT+A  A  
Sbjct: 76  NCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVHPLPPPPTSAVAAQH 135

Query: 181 RSDKSVA 201
            S KS +
Sbjct: 136 SSPKSAS 142


>ref|XP_002304730.1| predicted protein [Populus trichocarpa] gi|222842162|gb|EEE79709.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  105 bits (261), Expect = 5e-21
 Identities = 47/67 (70%), Positives = 53/67 (79%)
 Frame = +1

Query: 1   NCTTEGATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGL 180
           NCTTEGA GNWTSGKDFIPL+EAKRYYFICGNG CF+GMKV++LVH LP PP+ +  A  
Sbjct: 77  NCTTEGALGNWTSGKDFIPLNEAKRYYFICGNGQCFNGMKVTILVHPLPPPPSGSIAANS 136

Query: 181 RSDKSVA 201
               S A
Sbjct: 137 TPSGSAA 143


>ref|XP_002332055.1| predicted protein [Populus trichocarpa] gi|118483612|gb|ABK93701.1|
           unknown [Populus trichocarpa]
           gi|222831941|gb|EEE70418.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/68 (70%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   NCTTEGATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGV-AG 177
           NCTTEGA GNWTSGKDFIPL++AKRYYFI GNG CF+GMKV++LVH LP PPT+A + A 
Sbjct: 77  NCTTEGAVGNWTSGKDFIPLNKAKRYYFIGGNGQCFNGMKVTILVHPLPPPPTSATMAAN 136

Query: 178 LRSDKSVA 201
           ++S  S A
Sbjct: 137 VKSSDSAA 144


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