BLASTX nr result
ID: Coptis24_contig00031740
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031740 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifer... 110 2e-22 emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera] 110 2e-22 ref|NP_001237022.1| uncharacterized protein LOC100305555 precurs... 109 3e-22 ref|XP_002304730.1| predicted protein [Populus trichocarpa] gi|2... 105 5e-21 ref|XP_002332055.1| predicted protein [Populus trichocarpa] gi|1... 103 1e-20 >ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifera] gi|298204685|emb|CBI25183.3| unnamed protein product [Vitis vinifera] Length = 168 Score = 110 bits (274), Expect = 2e-22 Identities = 51/70 (72%), Positives = 58/70 (82%) Frame = +1 Query: 1 NCTTEGATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGL 180 NCTT+ ATGNW+SGKDFI LD+AKRYYFICGNGGCFSGMKVSVLVH LP+PP+A+ A Sbjct: 73 NCTTDSATGNWSSGKDFILLDKAKRYYFICGNGGCFSGMKVSVLVHPLPTPPSASTAAAE 132 Query: 181 RSDKSVAATR 210 S + AA R Sbjct: 133 ISKPNSAAAR 142 >emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera] Length = 168 Score = 110 bits (274), Expect = 2e-22 Identities = 51/70 (72%), Positives = 58/70 (82%) Frame = +1 Query: 1 NCTTEGATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGL 180 NCTT+ ATGNW+SGKDFI LD+AKRYYFICGNGGCFSGMKVSVLVH LP+PP+A+ A Sbjct: 73 NCTTDSATGNWSSGKDFILLDKAKRYYFICGNGGCFSGMKVSVLVHPLPTPPSASTAAAE 132 Query: 181 RSDKSVAATR 210 S + AA R Sbjct: 133 ISKPNSAAAR 142 >ref|NP_001237022.1| uncharacterized protein LOC100305555 precursor [Glycine max] gi|255625899|gb|ACU13294.1| unknown [Glycine max] Length = 170 Score = 109 bits (272), Expect = 3e-22 Identities = 50/67 (74%), Positives = 56/67 (83%) Frame = +1 Query: 1 NCTTEGATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGL 180 NCTTEGA GNW+SGKDFIPL++AKRYYFICGNG CFSGMKVSV+VH LP PPT+A A Sbjct: 76 NCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVHPLPPPPTSAVAAQH 135 Query: 181 RSDKSVA 201 S KS + Sbjct: 136 SSPKSAS 142 >ref|XP_002304730.1| predicted protein [Populus trichocarpa] gi|222842162|gb|EEE79709.1| predicted protein [Populus trichocarpa] Length = 171 Score = 105 bits (261), Expect = 5e-21 Identities = 47/67 (70%), Positives = 53/67 (79%) Frame = +1 Query: 1 NCTTEGATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGL 180 NCTTEGA GNWTSGKDFIPL+EAKRYYFICGNG CF+GMKV++LVH LP PP+ + A Sbjct: 77 NCTTEGALGNWTSGKDFIPLNEAKRYYFICGNGQCFNGMKVTILVHPLPPPPSGSIAANS 136 Query: 181 RSDKSVA 201 S A Sbjct: 137 TPSGSAA 143 >ref|XP_002332055.1| predicted protein [Populus trichocarpa] gi|118483612|gb|ABK93701.1| unknown [Populus trichocarpa] gi|222831941|gb|EEE70418.1| predicted protein [Populus trichocarpa] Length = 172 Score = 103 bits (257), Expect = 1e-20 Identities = 48/68 (70%), Positives = 57/68 (83%), Gaps = 1/68 (1%) Frame = +1 Query: 1 NCTTEGATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGV-AG 177 NCTTEGA GNWTSGKDFIPL++AKRYYFI GNG CF+GMKV++LVH LP PPT+A + A Sbjct: 77 NCTTEGAVGNWTSGKDFIPLNKAKRYYFIGGNGQCFNGMKVTILVHPLPPPPTSATMAAN 136 Query: 178 LRSDKSVA 201 ++S S A Sbjct: 137 VKSSDSAA 144