BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031723
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   183   1e-44
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   171   4e-41

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  183 bits (464), Expect = 1e-44
 Identities = 91/122 (74%), Positives = 103/122 (84%)
 Frame = +3

Query: 3    LVFIYCKIGFPETAHHLVDQAESLNFLQNDFTIYVDIIETYGKLKLCQRAESLVGKLRLK 182
            +V  YCK+GFPETAH+L+DQAE    L +D +I+  +IE YGKLKL Q+AESLVG LR K
Sbjct: 717  MVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQK 776

Query: 183  YSTVDRKVWNALIHAYAASGRYEQARAEFNTMIRDGPSPTVDSVNGLMQALIVDERLDEL 362
             + VDRKVWNALIHAYAASG YE+ARA FNTM+RDGPSPTVDSVNGLMQALIVD RLDEL
Sbjct: 777  CTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDEL 836

Query: 363  YV 368
            YV
Sbjct: 837  YV 838


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  183 bits (464), Expect = 1e-44
 Identities = 91/122 (74%), Positives = 103/122 (84%)
 Frame = +3

Query: 3    LVFIYCKIGFPETAHHLVDQAESLNFLQNDFTIYVDIIETYGKLKLCQRAESLVGKLRLK 182
            +V  YCK+GFPETAH+L+DQAE    L +D +I+  +IE YGKLKL Q+AESLVG LR K
Sbjct: 749  MVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQK 808

Query: 183  YSTVDRKVWNALIHAYAASGRYEQARAEFNTMIRDGPSPTVDSVNGLMQALIVDERLDEL 362
             + VDRKVWNALIHAYAASG YE+ARA FNTM+RDGPSPTVDSVNGLMQALIVD RLDEL
Sbjct: 809  CTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDEL 868

Query: 363  YV 368
            YV
Sbjct: 869  YV 870


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
            predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  179 bits (454), Expect = 2e-43
 Identities = 86/122 (70%), Positives = 104/122 (85%)
 Frame = +3

Query: 3    LVFIYCKIGFPETAHHLVDQAESLNFLQNDFTIYVDIIETYGKLKLCQRAESLVGKLRLK 182
            +V +YCK+GFPETAHHL+D AES   L N+ ++YV++IE YG+LKL Q+AES+ G LR +
Sbjct: 748  MVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQR 807

Query: 183  YSTVDRKVWNALIHAYAASGRYEQARAEFNTMIRDGPSPTVDSVNGLMQALIVDERLDEL 362
              TVDRKVWNALI AYAASG YE+ARA FNTM+RDGPSPTVD++NGL+QALIVD RLDEL
Sbjct: 808  CITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDEL 867

Query: 363  YV 368
            YV
Sbjct: 868  YV 869


>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Glycine max]
          Length = 1476

 Score =  173 bits (439), Expect = 1e-41
 Identities = 85/123 (69%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
 Frame = +3

Query: 3    LVFIYCKIGFPETAHHLVDQAESLNF-LQNDFTIYVDIIETYGKLKLCQRAESLVGKLRL 179
            +V +YC++  PETAHHL+  AE     L ND ++Y+DI+ETYGKLK+ Q+AESLVG LR 
Sbjct: 743  MVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQ 802

Query: 180  KYSTVDRKVWNALIHAYAASGRYEQARAEFNTMIRDGPSPTVDSVNGLMQALIVDERLDE 359
            + S +DRKVWNALIHAYA SG YE+ARA FNTM+RDGPSPTVDSVNGL+QALIVD RL+E
Sbjct: 803  RCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNE 862

Query: 360  LYV 368
            LYV
Sbjct: 863  LYV 865


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  171 bits (434), Expect = 4e-41
 Identities = 86/122 (70%), Positives = 101/122 (82%)
 Frame = +3

Query: 3    LVFIYCKIGFPETAHHLVDQAESLNFLQNDFTIYVDIIETYGKLKLCQRAESLVGKLRLK 182
            +V +YCK+GFPETAH+L+D AE      +  +I V +IETYGKLKL Q+AESLVG LR +
Sbjct: 705  MVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQR 764

Query: 183  YSTVDRKVWNALIHAYAASGRYEQARAEFNTMIRDGPSPTVDSVNGLMQALIVDERLDEL 362
             + VDRKVWNALI AYAASG YEQARA FNTM+RDGPSPTVDS+NGL+QALIVD RL+EL
Sbjct: 765  CTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEEL 824

Query: 363  YV 368
            YV
Sbjct: 825  YV 826