BLASTX nr result

ID: Coptis24_contig00031722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031722
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301147.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002320028.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002285345.1| PREDICTED: uncharacterized protein LOC100259...    80   2e-13
ref|XP_002510090.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_003589063.1| hypothetical protein MTR_1g017990 [Medicago ...    75   6e-12

>ref|XP_002301147.1| predicted protein [Populus trichocarpa] gi|222842873|gb|EEE80420.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 55/132 (41%), Positives = 73/132 (55%), Gaps = 13/132 (9%)
 Frame = +3

Query: 81  MFDMFVCGS-SNFDQVDEISTPHSSPPKRSR------------RVXXXXXXXXXXXXPFS 221
           M + F+CGS  N +  DE     SS PKRS                           P+S
Sbjct: 1   MLNSFICGSFQNQELEDEPWNSPSSTPKRSSPSATPKRSSPCATPRKSRKSSKNNKNPYS 60

Query: 222 TRGLEKFSSVLADLEEMKQKIYQNMGSDQEDSLMVRFGYSNAKDWIPIVVKLRDHEKQDK 401
           +RGL+KFS++LA+LEE +QKIY  +G   ED  +VRF YS++ D IP++VK +D +KQDK
Sbjct: 61  SRGLDKFSALLAELEEKRQKIYTQIG--PEDVSVVRFVYSSSNDCIPVIVKAKD-QKQDK 117

Query: 402 PNHVGNDDGKDK 437
           P     DD KDK
Sbjct: 118 PRASRVDDVKDK 129


>ref|XP_002320028.1| predicted protein [Populus trichocarpa] gi|222860801|gb|EEE98343.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 56/135 (41%), Positives = 79/135 (58%), Gaps = 17/135 (12%)
 Frame = +3

Query: 81  MFDMFVCGS-SNFDQVDEIS--TPHSSP--------PKRS------RRVXXXXXXXXXXX 209
           M   F+CGS  N  +V+E S  +P S+P        P+RS      R+            
Sbjct: 1   MLSSFICGSFKNQLEVEEESWNSPSSTPERSSPSATPERSSPSATPRKSRKSSKTGKNSK 60

Query: 210 XPFSTRGLEKFSSVLADLEEMKQKIYQNMGSDQEDSLMVRFGYSNAKDWIPIVVKLRDHE 389
            P+S+RGL+KFS++LA+LEE KQKIY  MG   ED  MVRF YS++ D IP+++K++D +
Sbjct: 61  NPYSSRGLDKFSALLAELEEKKQKIYSQMG--PEDVPMVRFVYSSSNDCIPLIIKVKD-Q 117

Query: 390 KQDKPNHVGNDDGKD 434
           KQDKP     +D K+
Sbjct: 118 KQDKPRIGSANDIKE 132


>ref|XP_002285345.1| PREDICTED: uncharacterized protein LOC100259057 [Vitis vinifera]
          Length = 250

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
 Frame = +3

Query: 81  MFDMFVCGSSN--FDQVDEISTPHSSPPKRSRRVXXXXXXXXXXXXPFSTRGLEKFSSVL 254
           M +  +CG+ +   D  DE     SS  +RSRR             P+S+RGL+KFS++L
Sbjct: 1   MLNPLICGTFHPEDDDDDEAYWSTSSTTRRSRR-------GRDSKNPYSSRGLDKFSALL 53

Query: 255 ADLEEMKQKIYQNMGSDQEDSLMVRFGYSNAKDWIPIVVKLRDHEKQD-KPNHV 413
           ADLEE +Q+IY  +GS  +D   VRF YSN+ D +PIVVKLRD + ++ K N+V
Sbjct: 54  ADLEEKRQQIYSQVGS--QDISFVRFAYSNSNDCVPIVVKLRDKKLENIKDNNV 105


>ref|XP_002510090.1| conserved hypothetical protein [Ricinus communis]
           gi|223550791|gb|EEF52277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/129 (38%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
 Frame = +3

Query: 81  MFDMFVCGSSNFDQVDE-----ISTPHSSPPKRSRRVXXXXXXXXXXXXPFSTRGLEKFS 245
           M    +CGS N  Q ++      S    S P++SR+             P+STRGL+KFS
Sbjct: 1   MLSPLICGSFNHQQEEDDRDSLSSNSPCSTPRKSRK------SNKDSKNPYSTRGLDKFS 54

Query: 246 SVLADLEEMKQKIYQNMGSDQEDSLMVRFGYSNAKDWIPIVVKLRDHEK-----QDKPNH 410
           ++LA+LEE +QKIY  +GS  +D   VRF YS++ + +PIVVKL+D  K     +DKP  
Sbjct: 55  ALLAELEEKRQKIYSQVGS--QDISFVRFVYSSSNEVVPIVVKLKDQNKAKDEIKDKPRT 112

Query: 411 VGNDDGKDK 437
               +  DK
Sbjct: 113 SSASETSDK 121


>ref|XP_003589063.1| hypothetical protein MTR_1g017990 [Medicago truncatula]
           gi|355478111|gb|AES59314.1| hypothetical protein
           MTR_1g017990 [Medicago truncatula]
          Length = 285

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
 Frame = +3

Query: 81  MFDMFVCGSSNFDQVDEI--STPHSSPPKRSRRVXXXXXXXXXXXXPFSTRGLEKFSSVL 254
           M + FVCG+ N +  DE+  + P SSP +  R+             P+STRGL+KFS++L
Sbjct: 1   MLNPFVCGTFNQEDEDELCRANPDSSPRRYKRK--------DSKNNPYSTRGLDKFSALL 52

Query: 255 ADLEEMKQKIYQNMGSDQEDSLMVRFGYSNAKDWIPIVVKLRDHEKQDK 401
           +DL + +QKIY  M  +  D   VRF +SN  D++PIVVK+++  ++ K
Sbjct: 53  SDLNDKRQKIYSQM--NPHDISFVRFVHSNKDDFVPIVVKVKNKSQELK 99


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