BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031710
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...    82   6e-14
emb|CBI17870.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...    79   5e-13
ref|XP_004162811.1| PREDICTED: RING-H2 finger protein ATL43-like...    73   2e-11
gb|AFW69273.1| putative RING zinc finger domain superfamily prot...    71   1e-10

>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
           gi|223550481|gb|EEF51968.1| ring finger protein,
           putative [Ricinus communis]
          Length = 493

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 55/122 (45%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
 Frame = -2

Query: 331 FFIWGFCF---EPLMAEREEK-TPPP-----QSLRXXXXXXXXXXXXXXXXXXLTYKPAL 179
           FFI  F F   +PL A+ + + TPPP     Q                       Y  + 
Sbjct: 12  FFILLFSFSLFQPLFADVDSRITPPPDAAATQQQMIRTTSLSNHLAAPPPLLLPNYMNSS 71

Query: 178 ATPFRPSIAVIVAVLTTMFSITFLLLLYAKHCKRGNGYHGNTNANGLT---TSTAQRNSG 8
           A PF+PSIAVIV VLTTMFSIT LLLLYAKHCKR + Y+   N  G T   T+ A++NSG
Sbjct: 72  APPFKPSIAVIVGVLTTMFSITLLLLLYAKHCKRAHIYNSFNNGGGGTGGQTAEARKNSG 131

Query: 7   ID 2
           ID
Sbjct: 132 ID 133


>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
 Frame = -2

Query: 175 TPFRPSIAVIVAVLTTMFSITFLLLLYAKHCKRGNG--YHGNTNANGLTTSTAQRNSGID 2
           +PFRPSIAVIV VLTTMFSITFLLLLYAKHCKRGNG  Y G        +S A++NSGID
Sbjct: 50  SPFRPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPP----LSSAARKNSGID 105


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
 Frame = -2

Query: 175 TPFRPSIAVIVAVLTTMFSITFLLLLYAKHCKRGNG--YHGNTNANGLTTSTAQRNSGID 2
           +PFRPSIAVIV VLTTMFSITFLLLLYAKHCKRGNG  Y G        +S A++NSGID
Sbjct: 50  SPFRPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPP----LSSAARKNSGID 105


>ref|XP_004162811.1| PREDICTED: RING-H2 finger protein ATL43-like [Cucumis sativus]
          Length = 391

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 6/64 (9%)
 Frame = -2

Query: 175 TPFRPSIAVIVAVLTTMFSITFLLLLYAKHCKRGN-----GYHGNTNA-NGLTTSTAQRN 14
           +PFRPS+AV+V VLTT FSITFLLLLYAKHCKRGN     GY    N   G+ + + ++N
Sbjct: 73  SPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMGVPSFSTRKN 132

Query: 13  SGID 2
           SGID
Sbjct: 133 SGID 136


>gb|AFW69273.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 397

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 10/72 (13%)
 Frame = -2

Query: 187 PALATPFRPSIAVIVAVLTTMFSITFLLLLYAKHCKR----GNGYHGNTNANGLTTSTA- 23
           P+ ATPFRP +AV+V +LT++FSITFLLLLYAKHCKR     +G +G+  + G   S+  
Sbjct: 25  PSSATPFRPGVAVVVGILTSVFSITFLLLLYAKHCKRSAAESSGPYGSAGSGGGFGSSGN 84

Query: 22  -----QRNSGID 2
                +RNSG+D
Sbjct: 85  GAGGDRRNSGVD 96