BLASTX nr result

ID: Coptis24_contig00031703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031703
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158359.1| PREDICTED: putative syntaxin-131-like [Cucum...    68   9e-10
ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222...    68   9e-10
ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus c...    66   3e-09
ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003592245.1| Double-stranded RNA binding protein [Medicag...    63   3e-08

>ref|XP_004158359.1| PREDICTED: putative syntaxin-131-like [Cucumis sativus]
          Length = 307

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/64 (53%), Positives = 41/64 (64%)
 Frame = -3

Query: 517 FKTKLQELCQSKLFPLPNYSSTRQGADHKPKFKATVIVNGVXXXXXXXXXXXKEAQNEAA 338
           FKTKLQELC  K + LP YS  +QG DH P+F+ATV V+G            K+AQN+AA
Sbjct: 2   FKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSPTPSKSSKQAQNDAA 61

Query: 337 KFAF 326
           K AF
Sbjct: 62  KLAF 65


>ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222879 [Cucumis sativus]
          Length = 446

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/64 (53%), Positives = 41/64 (64%)
 Frame = -3

Query: 517 FKTKLQELCQSKLFPLPNYSSTRQGADHKPKFKATVIVNGVXXXXXXXXXXXKEAQNEAA 338
           FKTKLQELC  K + LP YS  +QG DH P+F+ATV V+G            K+AQN+AA
Sbjct: 2   FKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSPTPSKSSKQAQNDAA 61

Query: 337 KFAF 326
           K AF
Sbjct: 62  KLAF 65


>ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus communis]
           gi|223535011|gb|EEF36694.1| hypothetical protein
           RCOM_1321840 [Ricinus communis]
          Length = 162

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/64 (54%), Positives = 39/64 (60%)
 Frame = -3

Query: 517 FKTKLQELCQSKLFPLPNYSSTRQGADHKPKFKATVIVNGVXXXXXXXXXXXKEAQNEAA 338
           +KTKLQELC  K + LP YS+T+ G DH P F ATVIVNG            K AQN AA
Sbjct: 2   YKTKLQELCHQKTWSLPEYSTTKVGQDHNPIFHATVIVNGYSFSSSSPSKSSKLAQNNAA 61

Query: 337 KFAF 326
           K AF
Sbjct: 62  KLAF 65


>ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|222858085|gb|EEE95632.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/64 (48%), Positives = 41/64 (64%)
 Frame = -3

Query: 517 FKTKLQELCQSKLFPLPNYSSTRQGADHKPKFKATVIVNGVXXXXXXXXXXXKEAQNEAA 338
           +K+KLQELCQ + + LP Y S+RQG  H P+F ATV VN +           K+AQN+AA
Sbjct: 2   YKSKLQELCQQRAWELPTYESSRQGQAHNPRFLATVTVNNISFHSPSPSNTSKKAQNDAA 61

Query: 337 KFAF 326
           K A+
Sbjct: 62  KLAY 65


>ref|XP_003592245.1| Double-stranded RNA binding protein [Medicago truncatula]
           gi|357462121|ref|XP_003601342.1| Double-stranded RNA
           binding protein [Medicago truncatula]
           gi|355481293|gb|AES62496.1| Double-stranded RNA binding
           protein [Medicago truncatula]
           gi|355490390|gb|AES71593.1| Double-stranded RNA binding
           protein [Medicago truncatula]
          Length = 424

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/64 (50%), Positives = 39/64 (60%)
 Frame = -3

Query: 517 FKTKLQELCQSKLFPLPNYSSTRQGADHKPKFKATVIVNGVXXXXXXXXXXXKEAQNEAA 338
           FKTKLQ+LC  + + LP Y++T  G  HKP F A+V VNGV           KEAQN+AA
Sbjct: 2   FKTKLQQLCHQRRWSLPKYTATNDGPQHKPSFNASVHVNGVTFASSDAFNSAKEAQNQAA 61

Query: 337 KFAF 326
             AF
Sbjct: 62  MKAF 65


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