BLASTX nr result
ID: Coptis24_contig00031699
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031699 (690 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_001779388.1| predicted protein [Physcomitrella patens sub... 103 3e-20 ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-l... 101 2e-19 ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-l... 101 2e-19 ref|NP_001151785.1| LOC100285420 [Zea mays] gi|195649671|gb|ACG4... 101 2e-19 emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group] 100 4e-19 >ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens] gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens] Length = 650 Score = 103 bits (257), Expect = 3e-20 Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 16/227 (7%) Frame = +1 Query: 40 QCMACLSNNNAAPGGSLINAALYVRDFDSGVTEKQLSELFSKYGEVISVEL------QEG 201 Q A ++ A P ++ +LYV D + V+E QL ELF++ G+V+S+ + + Sbjct: 9 QQQAAQASAGAPPPAQFVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRS 68 Query: 202 RRYAYVNFKRLEDAKTAKEVLMYEPINRNPNPLRIVMLSDQCEK---AKIWIKDLDSAVD 372 YAYVN+ +DA A E+L + +N NP + K A I+IK+LD +D Sbjct: 69 LGYAYVNYNSAQDATRALELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTID 128 Query: 373 CENLGLIFHQYGTVVSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFINGISVDI 531 + L F +G ++SC+ +S +GFVQF ++++AL AI +NG +N V + Sbjct: 129 NKALHDTFSAFGGILSCKVAVDGSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFV 188 Query: 532 VPYIXXXXXXXXXXXXXXXPTLYVKYMPVGASPYKLCVVFAAYGTVA 672 P++ +YVK + + L VF AYGT++ Sbjct: 189 GPFVRRQERDQSGGVSKFN-NVYVKNLGENTTEDDLKNVFGAYGTIS 234 >ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine max] Length = 642 Score = 101 bits (251), Expect = 2e-19 Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 16/216 (7%) Frame = +1 Query: 70 AAPGGSLINAALYVRDFDSGVTEKQLSELFSKYGEVISVEL------QEGRRYAYVNFKR 231 A GG NA+LYV D + V E+QL +LFS+ ++ S+ + + YAYVNF Sbjct: 26 ALGGGPFANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFAN 85 Query: 232 LEDAKTAKEVLMYEPINRNPNPLRIVMLSDQCEKA---KIWIKDLDSAVDCENLGLIFHQ 402 +DA A E+L + P+N P + K+ ++IK+LD+++D + L F Sbjct: 86 AQDASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAA 145 Query: 403 YGTVVSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFINGISVDIVPYIXXXXXX 561 +GTV+SC+ +S +GFVQF ++AA +AI LNG IN V + +I Sbjct: 146 FGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFI-RRQER 204 Query: 562 XXXXXXXXXPTLYVKYMPVGASPYKLCVVFAAYGTV 669 +YVK + + L +F YGT+ Sbjct: 205 EQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTI 240 Score = 57.4 bits (137), Expect = 3e-06 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 33/169 (19%) Frame = +1 Query: 103 LYVRDFDSGVTEKQLSELFSKYGEVISVELQE-----GRRYAYVNFKRLEDAKTAKEVLM 267 +YV++ T++ L +LF YG + S + + R + +VNF+ + A A E L Sbjct: 216 VYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLN 275 Query: 268 YEPINRNPNPLRIVMLSDQCEK---------------------AKIWIKDLDSAVDCENL 384 IN N L + + E+ A +++K+LD + E L Sbjct: 276 GTTIN-NDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKL 334 Query: 385 GLIFHQYGTVVSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFI 510 +F ++GT+ SC+ RS GFV FS + A A+ +NG I Sbjct: 335 KDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLI 383 >ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine max] Length = 652 Score = 101 bits (251), Expect = 2e-19 Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 16/216 (7%) Frame = +1 Query: 70 AAPGGSLINAALYVRDFDSGVTEKQLSELFSKYGEVISVEL------QEGRRYAYVNFKR 231 A GG NA+LYV D + V E+QL +LFS+ ++ S+ + + YAYVNF Sbjct: 26 ALGGGPFANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFAN 85 Query: 232 LEDAKTAKEVLMYEPINRNPNPLRIVMLSDQCEKA---KIWIKDLDSAVDCENLGLIFHQ 402 +DA A E+L + P+N P + K+ ++IK+LD+++D + L F Sbjct: 86 AQDASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAA 145 Query: 403 YGTVVSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFINGISVDIVPYIXXXXXX 561 +GTV+SC+ +S +GFVQF ++AA +AI LNG IN V + +I Sbjct: 146 FGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFI-RRQER 204 Query: 562 XXXXXXXXXPTLYVKYMPVGASPYKLCVVFAAYGTV 669 +YVK + + L +F YGT+ Sbjct: 205 EQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTI 240 Score = 57.4 bits (137), Expect = 3e-06 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 33/169 (19%) Frame = +1 Query: 103 LYVRDFDSGVTEKQLSELFSKYGEVISVELQE-----GRRYAYVNFKRLEDAKTAKEVLM 267 +YV++ T++ L +LF YG + S + + R + +VNF+ + A A E L Sbjct: 216 VYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLN 275 Query: 268 YEPINRNPNPLRIVMLSDQCEK---------------------AKIWIKDLDSAVDCENL 384 IN N L + + E+ A +++K+LD + E L Sbjct: 276 GTTIN-NDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKL 334 Query: 385 GLIFHQYGTVVSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFI 510 +F ++GT+ SC+ RS GFV FS + A A+ +NG I Sbjct: 335 KDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLI 383 >ref|NP_001151785.1| LOC100285420 [Zea mays] gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays] gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays] Length = 660 Score = 101 bits (251), Expect = 2e-19 Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 18/212 (8%) Frame = +1 Query: 88 LINAALYVRDFDSGVTEKQLSELFSKYGEVISVEL------QEGRRYAYVNFKRLEDAKT 249 L +LYV D + V++ QL ELFS+ G+V+SV + + YAYVNF DA Sbjct: 37 LPTTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAAR 96 Query: 250 AKEVLMYEPINRNPNPLRIVML-----SDQCEKAKIWIKDLDSAVDCENLGLIFHQYGTV 414 A EVL + P+N P +R++ S + A I+IK+LD +D ++L F +GT+ Sbjct: 97 ALEVLNFAPLNNKP--IRVMYSNRDPSSRRSGSANIFIKNLDKMIDNKSLHETFSSFGTI 154 Query: 415 VSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFINGISVDIVPYIXXXXXXXXXX 573 +SC+ +S FGFVQ+ +++AA +AI +LNG IN V + P++ Sbjct: 155 LSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFD 214 Query: 574 XXXXXPTLYVKYMPVGASPYKLCVVFAAYGTV 669 ++VK + + L +F YG + Sbjct: 215 KTKFN-NVFVKNLSESTTKEDLLKIFGEYGNI 245 >emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group] Length = 657 Score = 100 bits (248), Expect = 4e-19 Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 35/243 (14%) Frame = +1 Query: 46 MACLSNNNAAPGGSLINAA-----------------LYVRDFDSGVTEKQLSELFSKYGE 174 MA ++ N +PG AA LYV D ++ VT+ QL ELFS+ G+ Sbjct: 5 MAAVAVNGGSPGAVTAAAAAGGVGVAVGLGGGGAQSLYVGDLEASVTDSQLYELFSQAGQ 64 Query: 175 VISVEL------QEGRRYAYVNFKRLEDAKTAKEVLMYEPINRNPNPLRIVM-----LSD 321 V+SV + + YAYVNF DA A E+L + P+ N P+R++ S Sbjct: 65 VMSVRVCRDISSRRSLGYAYVNFNNPVDAARALELLNFAPL--NGKPIRVMYSNRDPSSR 122 Query: 322 QCEKAKIWIKDLDSAVDCENLGLIFHQYGTVVSCE-------RSGEFGFVQFSEKKAALD 480 + A I+IK+LD A+D + L F +G ++SC+ +S FGFVQ+ + +AA Sbjct: 123 RSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQS 182 Query: 481 AIAALNGSFINGISVDIVPYIXXXXXXXXXXXXXXXPTLYVKYMPVGASPYKLCVVFAAY 660 AI +LNG IN V + P++ ++VK + + L +F AY Sbjct: 183 AIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFN-NVFVKNLSESTTKEDLVKIFGAY 241 Query: 661 GTV 669 G + Sbjct: 242 GNI 244