BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031699
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001779388.1| predicted protein [Physcomitrella patens sub...   103   3e-20
ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-l...   101   2e-19
ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-l...   101   2e-19
ref|NP_001151785.1| LOC100285420 [Zea mays] gi|195649671|gb|ACG4...   101   2e-19
emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]        100   4e-19

>ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162669186|gb|EDQ55778.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 650

 Score =  103 bits (257), Expect = 3e-20
 Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 16/227 (7%)
 Frame = +1

Query: 40  QCMACLSNNNAAPGGSLINAALYVRDFDSGVTEKQLSELFSKYGEVISVEL------QEG 201
           Q  A  ++  A P    ++ +LYV D +  V+E QL ELF++ G+V+S+ +      +  
Sbjct: 9   QQQAAQASAGAPPPAQFVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRS 68

Query: 202 RRYAYVNFKRLEDAKTAKEVLMYEPINRNPNPLRIVMLSDQCEK---AKIWIKDLDSAVD 372
             YAYVN+   +DA  A E+L +  +N NP  +          K   A I+IK+LD  +D
Sbjct: 69  LGYAYVNYNSAQDATRALELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTID 128

Query: 373 CENLGLIFHQYGTVVSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFINGISVDI 531
            + L   F  +G ++SC+       +S  +GFVQF ++++AL AI  +NG  +N   V +
Sbjct: 129 NKALHDTFSAFGGILSCKVAVDGSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFV 188

Query: 532 VPYIXXXXXXXXXXXXXXXPTLYVKYMPVGASPYKLCVVFAAYGTVA 672
            P++                 +YVK +    +   L  VF AYGT++
Sbjct: 189 GPFVRRQERDQSGGVSKFN-NVYVKNLGENTTEDDLKNVFGAYGTIS 234


>ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
           max]
          Length = 642

 Score =  101 bits (251), Expect = 2e-19
 Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
 Frame = +1

Query: 70  AAPGGSLINAALYVRDFDSGVTEKQLSELFSKYGEVISVEL------QEGRRYAYVNFKR 231
           A  GG   NA+LYV D +  V E+QL +LFS+  ++ S+ +      +    YAYVNF  
Sbjct: 26  ALGGGPFANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFAN 85

Query: 232 LEDAKTAKEVLMYEPINRNPNPLRIVMLSDQCEKA---KIWIKDLDSAVDCENLGLIFHQ 402
            +DA  A E+L + P+N  P  +          K+    ++IK+LD+++D + L   F  
Sbjct: 86  AQDASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAA 145

Query: 403 YGTVVSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFINGISVDIVPYIXXXXXX 561
           +GTV+SC+       +S  +GFVQF  ++AA +AI  LNG  IN   V +  +I      
Sbjct: 146 FGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFI-RRQER 204

Query: 562 XXXXXXXXXPTLYVKYMPVGASPYKLCVVFAAYGTV 669
                      +YVK +    +   L  +F  YGT+
Sbjct: 205 EQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTI 240



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 33/169 (19%)
 Frame = +1

Query: 103 LYVRDFDSGVTEKQLSELFSKYGEVISVELQE-----GRRYAYVNFKRLEDAKTAKEVLM 267
           +YV++     T++ L +LF  YG + S  + +      R + +VNF+  + A  A E L 
Sbjct: 216 VYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLN 275

Query: 268 YEPINRNPNPLRIVMLSDQCEK---------------------AKIWIKDLDSAVDCENL 384
              IN N   L +     + E+                     A +++K+LD +   E L
Sbjct: 276 GTTIN-NDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKL 334

Query: 385 GLIFHQYGTVVSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFI 510
             +F ++GT+ SC+       RS   GFV FS  + A  A+  +NG  I
Sbjct: 335 KDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLI 383


>ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
           max]
          Length = 652

 Score =  101 bits (251), Expect = 2e-19
 Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
 Frame = +1

Query: 70  AAPGGSLINAALYVRDFDSGVTEKQLSELFSKYGEVISVEL------QEGRRYAYVNFKR 231
           A  GG   NA+LYV D +  V E+QL +LFS+  ++ S+ +      +    YAYVNF  
Sbjct: 26  ALGGGPFANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFAN 85

Query: 232 LEDAKTAKEVLMYEPINRNPNPLRIVMLSDQCEKA---KIWIKDLDSAVDCENLGLIFHQ 402
            +DA  A E+L + P+N  P  +          K+    ++IK+LD+++D + L   F  
Sbjct: 86  AQDASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAA 145

Query: 403 YGTVVSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFINGISVDIVPYIXXXXXX 561
           +GTV+SC+       +S  +GFVQF  ++AA +AI  LNG  IN   V +  +I      
Sbjct: 146 FGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFI-RRQER 204

Query: 562 XXXXXXXXXPTLYVKYMPVGASPYKLCVVFAAYGTV 669
                      +YVK +    +   L  +F  YGT+
Sbjct: 205 EQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTI 240



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 33/169 (19%)
 Frame = +1

Query: 103 LYVRDFDSGVTEKQLSELFSKYGEVISVELQE-----GRRYAYVNFKRLEDAKTAKEVLM 267
           +YV++     T++ L +LF  YG + S  + +      R + +VNF+  + A  A E L 
Sbjct: 216 VYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLN 275

Query: 268 YEPINRNPNPLRIVMLSDQCEK---------------------AKIWIKDLDSAVDCENL 384
              IN N   L +     + E+                     A +++K+LD +   E L
Sbjct: 276 GTTIN-NDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKL 334

Query: 385 GLIFHQYGTVVSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFI 510
             +F ++GT+ SC+       RS   GFV FS  + A  A+  +NG  I
Sbjct: 335 KDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLI 383


>ref|NP_001151785.1| LOC100285420 [Zea mays] gi|195649671|gb|ACG44303.1|
           polyadenylate-binding protein 2 [Zea mays]
           gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding
           protein 2 [Zea mays]
          Length = 660

 Score =  101 bits (251), Expect = 2e-19
 Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 18/212 (8%)
 Frame = +1

Query: 88  LINAALYVRDFDSGVTEKQLSELFSKYGEVISVEL------QEGRRYAYVNFKRLEDAKT 249
           L   +LYV D +  V++ QL ELFS+ G+V+SV +      +    YAYVNF    DA  
Sbjct: 37  LPTTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAAR 96

Query: 250 AKEVLMYEPINRNPNPLRIVML-----SDQCEKAKIWIKDLDSAVDCENLGLIFHQYGTV 414
           A EVL + P+N  P  +R++       S +   A I+IK+LD  +D ++L   F  +GT+
Sbjct: 97  ALEVLNFAPLNNKP--IRVMYSNRDPSSRRSGSANIFIKNLDKMIDNKSLHETFSSFGTI 154

Query: 415 VSCE-------RSGEFGFVQFSEKKAALDAIAALNGSFINGISVDIVPYIXXXXXXXXXX 573
           +SC+       +S  FGFVQ+ +++AA +AI +LNG  IN   V + P++          
Sbjct: 155 LSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFD 214

Query: 574 XXXXXPTLYVKYMPVGASPYKLCVVFAAYGTV 669
                  ++VK +    +   L  +F  YG +
Sbjct: 215 KTKFN-NVFVKNLSESTTKEDLLKIFGEYGNI 245


>emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
          Length = 657

 Score =  100 bits (248), Expect = 4e-19
 Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 35/243 (14%)
 Frame = +1

Query: 46  MACLSNNNAAPGGSLINAA-----------------LYVRDFDSGVTEKQLSELFSKYGE 174
           MA ++ N  +PG     AA                 LYV D ++ VT+ QL ELFS+ G+
Sbjct: 5   MAAVAVNGGSPGAVTAAAAAGGVGVAVGLGGGGAQSLYVGDLEASVTDSQLYELFSQAGQ 64

Query: 175 VISVEL------QEGRRYAYVNFKRLEDAKTAKEVLMYEPINRNPNPLRIVM-----LSD 321
           V+SV +      +    YAYVNF    DA  A E+L + P+  N  P+R++       S 
Sbjct: 65  VMSVRVCRDISSRRSLGYAYVNFNNPVDAARALELLNFAPL--NGKPIRVMYSNRDPSSR 122

Query: 322 QCEKAKIWIKDLDSAVDCENLGLIFHQYGTVVSCE-------RSGEFGFVQFSEKKAALD 480
           +   A I+IK+LD A+D + L   F  +G ++SC+       +S  FGFVQ+ + +AA  
Sbjct: 123 RSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQS 182

Query: 481 AIAALNGSFINGISVDIVPYIXXXXXXXXXXXXXXXPTLYVKYMPVGASPYKLCVVFAAY 660
           AI +LNG  IN   V + P++                 ++VK +    +   L  +F AY
Sbjct: 183 AIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFN-NVFVKNLSESTTKEDLVKIFGAY 241

Query: 661 GTV 669
           G +
Sbjct: 242 GNI 244