BLASTX nr result

ID: Coptis24_contig00031697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031697
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315734.1| magnesium transporter [Populus trichocarpa] ...    60   1e-07
ref|XP_002311660.1| magnesium transporter [Populus trichocarpa] ...    60   1e-07
ref|XP_004150432.1| PREDICTED: magnesium transporter MRS2-2-like...    59   4e-07
ref|XP_002520990.1| RNA splicing protein mrs2, mitochondrial, pu...    58   9e-07
ref|XP_003591809.1| Magnesium transporter [Medicago truncatula] ...    57   1e-06

>ref|XP_002315734.1| magnesium transporter [Populus trichocarpa]
           gi|222864774|gb|EEF01905.1| magnesium transporter
           [Populus trichocarpa]
          Length = 398

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
 Frame = +2

Query: 143 MSGEGYIVPVNSHA--TLMKKVSISRSWILIDSTGEGNIVDVDKHAIMNRV 289
           M  +GY+VP +  A  ++ KK   +RSWIL+D+TG+G I+D DKHAIMNRV
Sbjct: 1   MERDGYVVPADPPAVTSVKKKTQPARSWILVDATGQGTILDADKHAIMNRV 51


>ref|XP_002311660.1| magnesium transporter [Populus trichocarpa]
           gi|222851480|gb|EEE89027.1| magnesium transporter
           [Populus trichocarpa]
          Length = 394

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +2

Query: 143 MSGEGYIVPVN--SHATLMKKVSISRSWILIDSTGEGNIVDVDKHAIMNRV 289
           M+ +GY+VP +  + A + KK   +RSWIL+D+TG+G I+D DKHAIMNRV
Sbjct: 1   MARDGYVVPADPLAVAAVKKKTHPARSWILVDATGQGTILDADKHAIMNRV 51


>ref|XP_004150432.1| PREDICTED: magnesium transporter MRS2-2-like [Cucumis sativus]
           gi|449514585|ref|XP_004164422.1| PREDICTED: magnesium
           transporter MRS2-2-like [Cucumis sativus]
          Length = 393

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/51 (52%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +2

Query: 143 MSGEGYIVPVNSHA--TLMKKVSISRSWILIDSTGEGNIVDVDKHAIMNRV 289
           M+ +G++VPV+     T+ KK   SR+WIL+D TG+G ++DVDKHAIM+RV
Sbjct: 1   MARDGHVVPVDPQTALTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRV 51


>ref|XP_002520990.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus
           communis] gi|223539827|gb|EEF41407.1| RNA splicing
           protein mrs2, mitochondrial, putative [Ricinus communis]
          Length = 392

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = +2

Query: 161 IVPVNSHATLMKKVSISRSWILIDSTGEGNIVDVDKHAIMNRV 289
           +VP    A+L KK ++SRSWIL+DS G+ +I+DVDK+AIM RV
Sbjct: 7   VVPAEPQASLKKKTAVSRSWILLDSNGQSSILDVDKYAIMRRV 49


>ref|XP_003591809.1| Magnesium transporter [Medicago truncatula]
           gi|355480857|gb|AES62060.1| Magnesium transporter
           [Medicago truncatula]
          Length = 390

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = +2

Query: 143 MSGEGYIVPVNSHATLMKKVSISRSWILIDSTGEGNIVDVDKHAIMNRV 289
           M+ +G +VP +  A + KK   SRSWI  D TG+G+++DVDK+AIM+RV
Sbjct: 1   MARDGSVVPADPQALVKKKTQSSRSWIAFDGTGQGSLLDVDKYAIMHRV 49


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