BLASTX nr result

ID: Coptis24_contig00031686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031686
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300297.1| predicted protein [Populus trichocarpa] gi|2...    68   8e-10
ref|XP_002336384.1| predicted protein [Populus trichocarpa] gi|2...    68   8e-10
ref|XP_003541773.1| PREDICTED: uncharacterized protein LOC100810...    65   9e-09
ref|XP_003547109.1| PREDICTED: uncharacterized protein LOC100788...    64   2e-08
ref|XP_003593348.1| hypothetical protein MTR_2g010490 [Medicago ...    59   6e-07

>ref|XP_002300297.1| predicted protein [Populus trichocarpa] gi|222847555|gb|EEE85102.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
 Frame = +3

Query: 90  TKSQMLRQQPIRPKRGTGLKKTTLSFVASRRLSVIKETMSTISRPRATKSRSKDTXXXXX 269
           T+S  +R+   RP+  + +   TLS +   +L VIKE   T  RP+  +   K +     
Sbjct: 644 TRSSFVRKVA-RPQETSSITNETLSIMIPGQLGVIKEDSPTFLRPKEAEKPRKSSASLEI 702

Query: 270 XXXXXXXX----QGKRPVTIPKEPNFHKIHTPKSCTKTVA 377
                       QGKR  TIPKEPNFH IHTPKSCT+ VA
Sbjct: 703 KVSASTVSRQSLQGKRSATIPKEPNFHAIHTPKSCTRRVA 742


>ref|XP_002336384.1| predicted protein [Populus trichocarpa] gi|222834867|gb|EEE73316.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
 Frame = +3

Query: 90  TKSQMLRQQPIRPKRGTGLKKTTLSFVASRRLSVIKETMSTISRPRATKSRSKDTXXXXX 269
           T+S  +R+   RP+  + +   TLS +   +L VIKE   T  RP+  +   K +     
Sbjct: 89  TRSSFVRKVA-RPQETSSITNETLSIMIPGQLGVIKEDSPTFLRPKEAEKPRKSSASLEI 147

Query: 270 XXXXXXXX----QGKRPVTIPKEPNFHKIHTPKSCTKTVA 377
                       QGKR  TIPKEPNFH IHTPKSCT+ VA
Sbjct: 148 KVSASTVSRQSLQGKRSATIPKEPNFHAIHTPKSCTRRVA 187


>ref|XP_003541773.1| PREDICTED: uncharacterized protein LOC100810951 [Glycine max]
          Length = 699

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
 Frame = +3

Query: 15  ASSSTLRKKKLECMEKATERRECQPTKSQMLRQQPIRPKRGTGLKKTTLSFVASRRLSVI 194
           +++S LR      ++K T+  +    KS+M++++ +RP+     KK  +  V + +LSVI
Sbjct: 576 SATSPLRNPPGPKLQKVTDLDDNLKRKSRMMQRKIVRPRSALPRKKERV--VLATKLSVI 633

Query: 195 KETMSTISRPRATKSRSKDTXXXXXXXXXXXXXQ----GKRPVTIPKEPNFHKIHTPKSC 362
            E  S I +P+ TK R  D              +    GKR +T+PKEP F  +H PK C
Sbjct: 634 VEKASDIVKPKETKPRKNDAVSSPTSKTTGSIHRPFSRGKRDLTVPKEPKFQSLHVPKDC 693

Query: 363 T 365
           T
Sbjct: 694 T 694


>ref|XP_003547109.1| PREDICTED: uncharacterized protein LOC100788889 [Glycine max]
          Length = 695

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
 Frame = +3

Query: 54  MEKATERRECQPTKSQMLRQQPIRPKRGTGLKKTTLSFVASRRLSVIKETMSTISRPRAT 233
           ++KA ++ +    KSQM++++ +RP+     KK     V + +LSVI E  S I +P+ T
Sbjct: 587 LQKAIDQDDNFKRKSQMIQRKIVRPRSALPRKKEKA--VLATKLSVIIEKPSDIVKPKET 644

Query: 234 KSRSKD--TXXXXXXXXXXXXXQGKRPVTIPKEPNFHKIHTPKSCT 365
           K+R  D  +             +G+R +T+PKEP F  +H PK CT
Sbjct: 645 KARKNDAASSPTSTGSVHRPFSRGRRDLTVPKEPKFQSLHVPKDCT 690


>ref|XP_003593348.1| hypothetical protein MTR_2g010490 [Medicago truncatula]
           gi|355482396|gb|AES63599.1| hypothetical protein
           MTR_2g010490 [Medicago truncatula]
          Length = 708

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
 Frame = +3

Query: 18  SSSTLRKKKLECMEKATERRECQPTKSQMLRQQPIRPKRGTGLKKTTLSFVASRRLSVIK 197
           S+ T  +     ++K  +  E    KS+M+++  + P+     KK  +    + +L VI 
Sbjct: 597 SAKTPNRNPGSKLQKHIDLDENFKRKSKMMQRNVVMPRSVLSKKKEKVVLGTACKLGVIT 656

Query: 198 ETMSTISRPR-ATKSRSKDTXXXXXXXXXXXXXQGKRPVTIPKEPNFHKIHTPKSCT 365
           E  S   +P+  TK R  D              QG+R +T+PKEP FH +H PKSCT
Sbjct: 657 EKRSDTLKPKDTTKPRKNDASCS----------QGRRTLTVPKEPKFHSLHVPKSCT 703


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