BLASTX nr result

ID: Coptis24_contig00031679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031679
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264175.1| PREDICTED: probable cytochrome b5 isoform 2 ...   103   1e-20
ref|XP_004144166.1| PREDICTED: cytochrome b5-like [Cucumis sativ...    96   4e-18
ref|XP_002512059.1| cytochrome B5 isoform 1, putative [Ricinus c...    95   6e-18
ref|NP_001235769.1| uncharacterized protein LOC100500537 [Glycin...    93   3e-17
ref|XP_002893406.1| B5 #6 [Arabidopsis lyrata subsp. lyrata] gi|...    92   5e-17

>ref|XP_002264175.1| PREDICTED: probable cytochrome b5 isoform 2 [Vitis vinifera]
           gi|297738108|emb|CBI27309.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/111 (47%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
 Frame = -3

Query: 555 VVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFNDAGHSRDAIQLMQEFCIGXXXXX 376
           VVIDGKVYDVTTYLDEHPGGDDV+L +TG+DAT+DF DAGHS DA +LM+ FC+G     
Sbjct: 24  VVIDGKVYDVTTYLDEHPGGDDVILATTGKDATDDFEDAGHSNDARELMKSFCVGELDMS 83

Query: 375 XXXXXXXXXXXXXXXXXEV--LMNMTSQYWXXXXXXXXXXXXXXVLYLRKK 229
                                L+N+T QYW               L++RKK
Sbjct: 84  SPAIPELKISDKKQQTDVAQKLLNLTKQYWAVSVAIVGISVVAGFLFMRKK 134


>ref|XP_004144166.1| PREDICTED: cytochrome b5-like [Cucumis sativus]
           gi|449529403|ref|XP_004171689.1| PREDICTED: cytochrome
           b5-like [Cucumis sativus]
          Length = 131

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 49/109 (44%), Positives = 62/109 (56%)
 Frame = -3

Query: 555 VVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFNDAGHSRDAIQLMQEFCIGXXXXX 376
           ++IDGKVYD+T+YLDEHPGGDDV++ +TGRDAT+DF DAGHS+DA +LM++F IG     
Sbjct: 24  IIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGLLDTS 83

Query: 375 XXXXXXXXXXXXXXXXXEVLMNMTSQYWXXXXXXXXXXXXXXVLYLRKK 229
                             V   +T QYW                YLRKK
Sbjct: 84  SLDSLKLETNQVDGYATRV-QTLTKQYWKAPVAVIGISVVLGWAYLRKK 131


>ref|XP_002512059.1| cytochrome B5 isoform 1, putative [Ricinus communis]
           gi|223549239|gb|EEF50728.1| cytochrome B5 isoform 1,
           putative [Ricinus communis]
          Length = 125

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 49/111 (44%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
 Frame = -3

Query: 555 VVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFNDAGHSRDAIQLMQEFCIGXXXXX 376
           +VIDGKVYDV++YLDEHPGGDDV++ +T +DAT+DF DAGHS DA +L+  FCIG     
Sbjct: 15  IVIDGKVYDVSSYLDEHPGGDDVVIAATAKDATDDFEDAGHSEDARELLNSFCIGELDAS 74

Query: 375 XXXXXXXXXXXXXXXXXEV--LMNMTSQYWXXXXXXXXXXXXXXVLYLRKK 229
                                L ++T QYW               LYLRKK
Sbjct: 75  APAIPELEISTKKQPAAHALKLKDLTKQYWTVPVAIAGLSVMVGFLYLRKK 125


>ref|NP_001235769.1| uncharacterized protein LOC100500537 [Glycine max]
           gi|255630583|gb|ACU15651.1| unknown [Glycine max]
          Length = 121

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/109 (42%), Positives = 61/109 (55%)
 Frame = -3

Query: 555 VVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFNDAGHSRDAIQLMQEFCIGXXXXX 376
           +++DGKVYDVT YLD+HPGGDDV+L +TG+DATE+F DAGHS+ A + M+++CIG     
Sbjct: 24  ILVDGKVYDVTQYLDDHPGGDDVILAATGKDATEEFEDAGHSKSAREHMEQYCIGELDTS 83

Query: 375 XXXXXXXXXXXXXXXXXEVLMNMTSQYWXXXXXXXXXXXXXXVLYLRKK 229
                               + +T QYW               LYLRKK
Sbjct: 84  SPISTKEK-----------FIQLTKQYWVVPATVVGISVVVAFLYLRKK 121


>ref|XP_002893406.1| B5 #6 [Arabidopsis lyrata subsp. lyrata]
           gi|297339248|gb|EFH69665.1| B5 #6 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 135

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 41/55 (74%), Positives = 50/55 (90%)
 Frame = -3

Query: 555 VVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFNDAGHSRDAIQLMQEFCIG 391
           VVIDGKVYDVT+Y+DEHPGGDDVLL  TG+DAT+DF DAGHS+DA +LM+++ IG
Sbjct: 24  VVIDGKVYDVTSYMDEHPGGDDVLLAVTGKDATDDFEDAGHSKDARELMEKYFIG 78


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