BLASTX nr result

ID: Coptis24_contig00031676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031676
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA18652.1| glutamate decarboxylase [Populus tremula x Populu...   256   1e-66
ref|NP_001052919.1| Os04g0447800 [Oryza sativa Japonica Group] g...   256   2e-66
dbj|BAB32869.1| glutamate decarboxylase [Oryza sativa Japonica G...   256   2e-66
ref|XP_002327596.1| predicted protein [Populus trichocarpa] gi|2...   256   2e-66
ref|XP_002305927.1| predicted protein [Populus trichocarpa] gi|2...   255   2e-66

>gb|ABA18652.1| glutamate decarboxylase [Populus tremula x Populus alba]
          Length = 499

 Score =  256 bits (655), Expect = 1e-66
 Identities = 122/142 (85%), Positives = 128/142 (90%)
 Frame = -2

Query: 426 NTICVAAILGSTLNGEFEDVXXXXXXXXXXXKISGWETPIHVDAASGGFIAPFVYPELEW 247
           NTICVAAILGSTLNGEFEDV           K +GW+TPIHVDAASGGFIAPF+YPELEW
Sbjct: 202 NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKSTGWDTPIHVDAASGGFIAPFIYPELEW 261

Query: 246 DFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 67
           DFRLPLVKSINVSGHKYGLVYAG+GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG
Sbjct: 262 DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 321

Query: 66  SSQIIAQYYQFLRLGSEGYKNV 1
           SSQ+IAQYYQ +RLG EGYKNV
Sbjct: 322 SSQVIAQYYQLIRLGYEGYKNV 343


>ref|NP_001052919.1| Os04g0447800 [Oryza sativa Japonica Group]
           gi|38344825|emb|CAD40877.2| OSJNBa0064H22.6 [Oryza
           sativa Japonica Group] gi|113564490|dbj|BAF14833.1|
           Os04g0447800 [Oryza sativa Japonica Group]
           gi|116310182|emb|CAH67194.1| OSIGBa0152K17.6 [Oryza
           sativa Indica Group] gi|218194937|gb|EEC77364.1|
           hypothetical protein OsI_16074 [Oryza sativa Indica
           Group]
          Length = 500

 Score =  256 bits (653), Expect = 2e-66
 Identities = 124/142 (87%), Positives = 128/142 (90%)
 Frame = -2

Query: 426 NTICVAAILGSTLNGEFEDVXXXXXXXXXXXKISGWETPIHVDAASGGFIAPFVYPELEW 247
           NTICVAAILGSTL GEFEDV           K +GW+TPIHVDAASGGFIAPF+YPELEW
Sbjct: 204 NTICVAAILGSTLTGEFEDVRRLNDLLAAKNKRTGWDTPIHVDAASGGFIAPFIYPELEW 263

Query: 246 DFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 67
           DFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG
Sbjct: 264 DFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 323

Query: 66  SSQIIAQYYQFLRLGSEGYKNV 1
           SSQIIAQYYQFLRLG EGYK+V
Sbjct: 324 SSQIIAQYYQFLRLGFEGYKSV 345


>dbj|BAB32869.1| glutamate decarboxylase [Oryza sativa Japonica Group]
           gi|13111474|dbj|BAB32871.1| glutamate decarboxylase
           [Oryza sativa Japonica Group]
          Length = 500

 Score =  256 bits (653), Expect = 2e-66
 Identities = 124/142 (87%), Positives = 128/142 (90%)
 Frame = -2

Query: 426 NTICVAAILGSTLNGEFEDVXXXXXXXXXXXKISGWETPIHVDAASGGFIAPFVYPELEW 247
           NTICVAAILGSTL GEFEDV           K +GW+TPIHVDAASGGFIAPF+YPELEW
Sbjct: 204 NTICVAAILGSTLTGEFEDVRRLNDLLAAKNKRTGWDTPIHVDAASGGFIAPFIYPELEW 263

Query: 246 DFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 67
           DFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG
Sbjct: 264 DFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 323

Query: 66  SSQIIAQYYQFLRLGSEGYKNV 1
           SSQIIAQYYQFLRLG EGYK+V
Sbjct: 324 SSQIIAQYYQFLRLGFEGYKSV 345


>ref|XP_002327596.1| predicted protein [Populus trichocarpa] gi|222836150|gb|EEE74571.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  256 bits (653), Expect = 2e-66
 Identities = 121/142 (85%), Positives = 128/142 (90%)
 Frame = -2

Query: 426 NTICVAAILGSTLNGEFEDVXXXXXXXXXXXKISGWETPIHVDAASGGFIAPFVYPELEW 247
           NTICVAAILGSTLNGEFEDV           K +GW+TPIHVDAASGGFIAPF+YPELEW
Sbjct: 202 NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEW 261

Query: 246 DFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 67
           DFRLPLVKSINVSGHKYGLVYAG+GWV+WRNKEDLPEELIFHINYLGADQPTFTLNFSKG
Sbjct: 262 DFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 321

Query: 66  SSQIIAQYYQFLRLGSEGYKNV 1
           SSQ+IAQYYQ +RLG EGYKNV
Sbjct: 322 SSQVIAQYYQLIRLGYEGYKNV 343


>ref|XP_002305927.1| predicted protein [Populus trichocarpa] gi|222848891|gb|EEE86438.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  255 bits (652), Expect = 2e-66
 Identities = 121/142 (85%), Positives = 128/142 (90%)
 Frame = -2

Query: 426 NTICVAAILGSTLNGEFEDVXXXXXXXXXXXKISGWETPIHVDAASGGFIAPFVYPELEW 247
           NTICVAAILGSTLNGEFEDV           K +GW+TPIHVDAASGGFIAPF+YPELEW
Sbjct: 202 NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKSTGWDTPIHVDAASGGFIAPFIYPELEW 261

Query: 246 DFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 67
           DFRLPLVKSINVSGHKYGLVYAG+GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG
Sbjct: 262 DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 321

Query: 66  SSQIIAQYYQFLRLGSEGYKNV 1
           SSQ+IAQYYQ +RLG EGY+NV
Sbjct: 322 SSQVIAQYYQLIRLGYEGYRNV 343


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