BLASTX nr result

ID: Coptis24_contig00031655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031655
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267983.1| PREDICTED: uncharacterized protein LOC100248...   280   2e-73
ref|XP_002321884.1| predicted protein [Populus trichocarpa] gi|2...   247   2e-63
ref|XP_002275855.1| PREDICTED: uncharacterized protein LOC100265...   243   4e-62
ref|XP_002298075.1| predicted protein [Populus trichocarpa] gi|2...   234   1e-59
emb|CBI31864.3| unnamed protein product [Vitis vinifera]              232   5e-59

>ref|XP_002267983.1| PREDICTED: uncharacterized protein LOC100248586 [Vitis vinifera]
          Length = 654

 Score =  280 bits (717), Expect = 2e-73
 Identities = 151/238 (63%), Positives = 181/238 (76%), Gaps = 2/238 (0%)
 Frame = +3

Query: 3    SSYSGPISAQVEIRDDKCLSSTERHNEESEHGETSELRETEPCTEQMNYLTSEIVEV--P 176
            SS+SGP+S Q      K LS       E E GETSEL +TE   +     TS+++E+  P
Sbjct: 404  SSFSGPLSIQ------KTLSG----RFEYEQGETSELPKTEGTAKHDRPETSKVIEMEKP 453

Query: 177  SDSVKLETTQINTAEADRKVSIECRGLDHADSLGLINISTRARCQINWVVNALSKLQHPH 356
            +D V+ + T++   E    + IECRGLDH DSLGL+ IS RAR  INW+VNAL+KL HP+
Sbjct: 454  ADFVQ-QNTKVRGKEG---LEIECRGLDHVDSLGLVLISRRARYLINWLVNALTKLHHPN 509

Query: 357  TEKGLPLVQIYGPKIKFDRGPALSFNVFDWKGEKVEPVLVQKLADRSNISLSYGFLNNLW 536
            TE+G PLV+IYGP IKF+RGPAL+FNVFDWKGEKVEP+L+QKLADRSNISLSYGFL++LW
Sbjct: 510  TEEGSPLVRIYGPNIKFERGPALAFNVFDWKGEKVEPILLQKLADRSNISLSYGFLHHLW 569

Query: 537  FSDKYEAEKERVVETRLRGTDGTAQSKRKEKVDIGITVVTAALGFLNNFEDIYRLWAF 710
            FSDKYEAEK+RV+E R     G AQ+KRK K D+GITVVTAALGFL NFEDIYRLWAF
Sbjct: 570  FSDKYEAEKQRVIERRETEAKGMAQNKRKGKDDLGITVVTAALGFLTNFEDIYRLWAF 627


>ref|XP_002321884.1| predicted protein [Populus trichocarpa] gi|222868880|gb|EEF06011.1|
            predicted protein [Populus trichocarpa]
          Length = 645

 Score =  247 bits (630), Expect = 2e-63
 Identities = 133/236 (56%), Positives = 162/236 (68%)
 Frame = +3

Query: 3    SSYSGPISAQVEIRDDKCLSSTERHNEESEHGETSELRETEPCTEQMNYLTSEIVEVPSD 182
            +S+SGPIS+Q              H+   E GETSE + T    +Q    TS+IVE    
Sbjct: 403  NSFSGPISSQT------------MHSGRVEQGETSESQTTGTTAKQKVSKTSDIVESGKS 450

Query: 183  SVKLETTQINTAEADRKVSIECRGLDHADSLGLINISTRARCQINWVVNALSKLQHPHTE 362
            +  +        + +  + IECRGLD  DSLGL  IS RARC INW+VNAL KL+HP+T 
Sbjct: 451  AEVMR-------QENGILEIECRGLDQVDSLGLTRISNRARCLINWMVNALLKLKHPNTG 503

Query: 363  KGLPLVQIYGPKIKFDRGPALSFNVFDWKGEKVEPVLVQKLADRSNISLSYGFLNNLWFS 542
            + +PLV+IYGP++KFDRGPAL+FN+FDWKGEKVE  LVQKLADRSNISLSYGFL+++ FS
Sbjct: 504  E-IPLVRIYGPRVKFDRGPALAFNLFDWKGEKVEAPLVQKLADRSNISLSYGFLHHISFS 562

Query: 543  DKYEAEKERVVETRLRGTDGTAQSKRKEKVDIGITVVTAALGFLNNFEDIYRLWAF 710
            D+YE EK  V+E R+ G  GT  +KRKEK D GITVVT ALG L NFED YR WAF
Sbjct: 563  DEYEEEKATVLEKRVNGAKGTVTNKRKEKADFGITVVTVALGVLANFEDTYRFWAF 618


>ref|XP_002275855.1| PREDICTED: uncharacterized protein LOC100265017 [Vitis vinifera]
          Length = 652

 Score =  243 bits (619), Expect = 4e-62
 Identities = 129/236 (54%), Positives = 162/236 (68%)
 Frame = +3

Query: 3    SSYSGPISAQVEIRDDKCLSSTERHNEESEHGETSELRETEPCTEQMNYLTSEIVEVPSD 182
            SS SGP+  Q            +  NE  E  E S++       +Q    +SEIVE+   
Sbjct: 408  SSLSGPLPVQ------------KISNETFESYEISDVN-----FKQKGSSSSEIVELEMP 450

Query: 183  SVKLETTQINTAEADRKVSIECRGLDHADSLGLINISTRARCQINWVVNALSKLQHPHTE 362
             + +  +    +  +    IECRGLDHADSLGLI IS RAR  INW+VNAL  L+HPH+E
Sbjct: 451  -LDIPQSLNKDSSVNGYSQIECRGLDHADSLGLILISLRARFLINWLVNALMSLRHPHSE 509

Query: 363  KGLPLVQIYGPKIKFDRGPALSFNVFDWKGEKVEPVLVQKLADRSNISLSYGFLNNLWFS 542
             GLPLV+IYGP + FDRGPA++FNVFDWKGEKVEP LVQKLADRSNISLS+GFL ++WFS
Sbjct: 510  NGLPLVRIYGPNVAFDRGPAVAFNVFDWKGEKVEPTLVQKLADRSNISLSHGFLQHIWFS 569

Query: 543  DKYEAEKERVVETRLRGTDGTAQSKRKEKVDIGITVVTAALGFLNNFEDIYRLWAF 710
            DKYE EKE+++E R  G +GT  +K+++K   GI+VV+AALG L NFED+Y LWAF
Sbjct: 570  DKYEEEKEKILELRTIGVEGTLGNKKRDKSSSGISVVSAALGLLTNFEDVYNLWAF 625


>ref|XP_002298075.1| predicted protein [Populus trichocarpa] gi|222845333|gb|EEE82880.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  234 bits (597), Expect = 1e-59
 Identities = 112/181 (61%), Positives = 146/181 (80%)
 Frame = +3

Query: 168 EVPSDSVKLETTQINTAEADRKVSIECRGLDHADSLGLINISTRARCQINWVVNALSKLQ 347
           ++  +S   +T     A+ D    +ECRGLDHADSLGLI+ISTRAR  INW+VNAL+ LQ
Sbjct: 375 QISEESANDDTETEEKAKQDGYSYLECRGLDHADSLGLISISTRARYLINWLVNALTSLQ 434

Query: 348 HPHTEKGLPLVQIYGPKIKFDRGPALSFNVFDWKGEKVEPVLVQKLADRSNISLSYGFLN 527
           HPH+E G PLV+IYGPK+KFDRGPA++FNVFDWKGEK++P +VQKLADR+NISLS GFL+
Sbjct: 435 HPHSENGHPLVRIYGPKVKFDRGPAVAFNVFDWKGEKIDPAIVQKLADRNNISLSCGFLH 494

Query: 528 NLWFSDKYEAEKERVVETRLRGTDGTAQSKRKEKVDIGITVVTAALGFLNNFEDIYRLWA 707
           ++ FS+KYE E+E+++ETR     GT  + +++K+  GI+VVTAALGFL NFED+Y+LWA
Sbjct: 495 HILFSNKYEHEREQILETR-TSEGGTVLNGKRDKLYSGISVVTAALGFLTNFEDVYKLWA 553

Query: 708 F 710
           F
Sbjct: 554 F 554


>emb|CBI31864.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  232 bits (592), Expect = 5e-59
 Identities = 119/168 (70%), Positives = 135/168 (80%), Gaps = 2/168 (1%)
 Frame = +3

Query: 213 TAEADRKVS--IECRGLDHADSLGLINISTRARCQINWVVNALSKLQHPHTEKGLPLVQI 386
           TA+ DR  +  IECRGLDH DSLGL+ IS RAR  INW+VNAL+KL HP+TE+G PLV+I
Sbjct: 42  TAKHDRPETSKIECRGLDHVDSLGLVLISRRARYLINWLVNALTKLHHPNTEEGSPLVRI 101

Query: 387 YGPKIKFDRGPALSFNVFDWKGEKVEPVLVQKLADRSNISLSYGFLNNLWFSDKYEAEKE 566
           YGP IKF+RGPAL+FNVFDWKGEKVEP+L+QKLADRSNISLSYGFL++LWFSDK    K 
Sbjct: 102 YGPNIKFERGPALAFNVFDWKGEKVEPILLQKLADRSNISLSYGFLHHLWFSDKETEAK- 160

Query: 567 RVVETRLRGTDGTAQSKRKEKVDIGITVVTAALGFLNNFEDIYRLWAF 710
                      G AQ+KRK K D+GITVVTAALGFL NFEDIYRLWAF
Sbjct: 161 -----------GMAQNKRKGKDDLGITVVTAALGFLTNFEDIYRLWAF 197


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