BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031636
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB87913.1| SKP1-like protein 1 [Malus x domestica]                 67   1e-09
ref|XP_003621661.1| SKP1-like protein [Medicago truncatula] gi|3...    65   7e-09
ref|XP_002279232.1| PREDICTED: SKP1-like protein 1A [Vitis vinif...    64   1e-08
gb|AFK44762.1| unknown [Lotus japonicus]                               63   2e-08
ref|XP_003517160.1| PREDICTED: SKP1-like protein 1A-like [Glycin...    63   2e-08

>gb|ACB87913.1| SKP1-like protein 1 [Malus x domestica]
          Length = 156

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
 Frame = -1

Query: 216 KNLIEDGCTDGGIPIHNVTGDILAMVIEYCVNH--AVKPDAXXXXXXXXXXXXXXXXXDQ 43
           K++IED C D GIP+ NVT  ILA VIEYC  H  A KPD                  DQ
Sbjct: 32  KHMIEDDCADNGIPLPNVTSKILAKVIEYCKRHVDAAKPDEKISEDDLKAWDQEFVKVDQ 91

Query: 42  ATLFELVLAAHYLD 1
           ATLF+L+LAA+YL+
Sbjct: 92  ATLFDLILAANYLN 105


>ref|XP_003621661.1| SKP1-like protein [Medicago truncatula] gi|355496676|gb|AES77879.1|
           SKP1-like protein [Medicago truncatula]
          Length = 156

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
 Frame = -1

Query: 216 KNLIEDGCTDGGIPIHNVTGDILAMVIEYCVNH--AVKPDAXXXXXXXXXXXXXXXXXDQ 43
           K++IED CTD GIP+ NVTG ILA VIEYC  H  A   D                  DQ
Sbjct: 32  KHMIEDDCTDNGIPVPNVTGQILAKVIEYCKKHVDAASSDEKPSEDDLKNWDAEFVKVDQ 91

Query: 42  ATLFELVLAAHYLD 1
            TLF+L+LAA+YL+
Sbjct: 92  DTLFDLILAANYLN 105


>ref|XP_002279232.1| PREDICTED: SKP1-like protein 1A [Vitis vinifera]
           gi|147820987|emb|CAN73136.1| hypothetical protein
           VITISV_023042 [Vitis vinifera]
          Length = 155

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/74 (48%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = -1

Query: 216 KNLIEDGCTDGGIPIHNVTGDILAMVIEYCVNHAVKPDA--XXXXXXXXXXXXXXXXXDQ 43
           K++IEDGC D  IP+ NVT  ILA VIEYC  H   P A                   DQ
Sbjct: 31  KHMIEDGCADNAIPLPNVTSKILAKVIEYCKKHVETPKAEEHAVNDELKAWDADFVKVDQ 90

Query: 42  ATLFELVLAAHYLD 1
           ATLF+L+LAA+YLD
Sbjct: 91  ATLFDLILAANYLD 104


>gb|AFK44762.1| unknown [Lotus japonicus]
          Length = 155

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = -1

Query: 216 KNLIEDGCTDGGIPIHNVTGDILAMVIEYCVNH--AVKPDAXXXXXXXXXXXXXXXXXDQ 43
           K+++ED C D GIP+ N T  ILA VIEYC  H  A  PD                  DQ
Sbjct: 31  KHMVEDDCADSGIPLPNATSKILAKVIEYCKKHVEAANPDEKPTEDELKAWDADFVKVDQ 90

Query: 42  ATLFELVLAAHYLD 1
           ATLF+L+LAA+YL+
Sbjct: 91  ATLFDLILAANYLN 104


>ref|XP_003517160.1| PREDICTED: SKP1-like protein 1A-like [Glycine max]
          Length = 155

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
 Frame = -1

Query: 216 KNLIEDGCTDGGIPIHNVTGDILAMVIEYCVNH--AVKPDAXXXXXXXXXXXXXXXXXDQ 43
           K++IED C D GIP+ NVT  ILA VIEYC  H  A  P+                  DQ
Sbjct: 31  KHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVEAANPEDKPSEDDLKAWDADFVKVDQ 90

Query: 42  ATLFELVLAAHYLD 1
           ATLF+L+LAA+YL+
Sbjct: 91  ATLFDLILAANYLN 104