BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031630
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329765.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002305019.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra...    90   2e-16
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...    90   2e-16

>ref|XP_002329765.1| predicted protein [Populus trichocarpa] gi|222870827|gb|EEF07958.1|
           predicted protein [Populus trichocarpa]
          Length = 820

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/72 (65%), Positives = 51/72 (70%)
 Frame = +3

Query: 12  SLDRIKCRLLEGRSAQEVRAXXXXXXXXXXXXXXGKGIESALINPGTLVSEPWLASGEML 191
           SLDRIKCRLLEG +AQEVRA              G+GIESALINP  LVSEPW ASGE L
Sbjct: 685 SLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGRGIESALINPSALVSEPWQASGETL 744

Query: 192 SGIDADVMTIEP 227
           SGID + MT+EP
Sbjct: 745 SGIDPEAMTVEP 756


>ref|XP_002305019.1| predicted protein [Populus trichocarpa] gi|222847983|gb|EEE85530.1|
           predicted protein [Populus trichocarpa]
          Length = 741

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 47/72 (65%), Positives = 50/72 (69%)
 Frame = +3

Query: 12  SLDRIKCRLLEGRSAQEVRAXXXXXXXXXXXXXXGKGIESALINPGTLVSEPWLASGEML 191
           SLDRIKCRLLEG +AQEVRA              GKGIESALINP  LV EPW ASGE L
Sbjct: 606 SLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPEPWQASGETL 665

Query: 192 SGIDADVMTIEP 227
           SGID + MT+EP
Sbjct: 666 SGIDPEAMTVEP 677


>ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|222848774|gb|EEE86321.1|
           predicted protein [Populus trichocarpa]
          Length = 1328

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/72 (65%), Positives = 50/72 (69%)
 Frame = +3

Query: 12  SLDRIKCRLLEGRSAQEVRAXXXXXXXXXXXXXXGKGIESALINPGTLVSEPWLASGEML 191
           SLDRIKCRLLEG +AQEVRA              GKGIESALINP  LV EPW ASGE L
Sbjct: 754 SLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVLEPWQASGETL 813

Query: 192 SGIDADVMTIEP 227
           SGID + MT+EP
Sbjct: 814 SGIDPEAMTVEP 825


>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1143

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/72 (63%), Positives = 50/72 (69%)
 Frame = +3

Query: 12  SLDRIKCRLLEGRSAQEVRAXXXXXXXXXXXXXXGKGIESALINPGTLVSEPWLASGEML 191
           SLDRIKCRLLEG +AQEVRA              GKGIESALINP  L+SEPW ASGE L
Sbjct: 598 SLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALLSEPWHASGETL 657

Query: 192 SGIDADVMTIEP 227
           SGID + M +EP
Sbjct: 658 SGIDPEAMAVEP 669


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1220

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/72 (63%), Positives = 50/72 (69%)
 Frame = +3

Query: 12  SLDRIKCRLLEGRSAQEVRAXXXXXXXXXXXXXXGKGIESALINPGTLVSEPWLASGEML 191
           SLDRIKCRLLEG +AQEVRA              GKGIESALINP  L+SEPW ASGE L
Sbjct: 675 SLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALLSEPWHASGETL 734

Query: 192 SGIDADVMTIEP 227
           SGID + M +EP
Sbjct: 735 SGIDPEAMAVEP 746