BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031629
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]   108   3e-22
emb|CBI20261.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...   108   6e-22
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,...    95   5e-18
ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat...    92   3e-17

>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
          Length = 546

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/94 (53%), Positives = 71/94 (75%)
 Frame = -1

Query: 283 EVQSILQVHMNNSVKEVEKALDRCGLVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 104
           EVQ++L+ + ++SV E+E AL +C L L DD VL++LK HRSDW+ A  +F W S+ G +
Sbjct: 89  EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGXE 148

Query: 103 KMYSPGSSVYNEMIDILGRMKRFMELGEVFDEMS 2
             YSPG  V+NE++DILGRM+RF E+ ++FDEMS
Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182


>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/94 (53%), Positives = 71/94 (75%)
 Frame = -1

Query: 283 EVQSILQVHMNNSVKEVEKALDRCGLVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 104
           EVQ++L+ + ++SV E+E AL +C L L DD VL++LK HRSDW+ A  +F W S+ G +
Sbjct: 89  EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIE 148

Query: 103 KMYSPGSSVYNEMIDILGRMKRFMELGEVFDEMS 2
             YSPG  V+NE++DILGRM+RF E+ ++FDEMS
Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/94 (53%), Positives = 71/94 (75%)
 Frame = -1

Query: 283 EVQSILQVHMNNSVKEVEKALDRCGLVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 104
           EVQ++L+ + ++SV E+E AL +C L L DD VL++LK HRSDW+ A  +F W S+ G +
Sbjct: 89  EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIE 148

Query: 103 KMYSPGSSVYNEMIDILGRMKRFMELGEVFDEMS 2
             YSPG  V+NE++DILGRM+RF E+ ++FDEMS
Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182


>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/94 (47%), Positives = 68/94 (72%)
 Frame = -1

Query: 283 EVQSILQVHMNNSVKEVEKALDRCGLVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 104
           +VQ++L+ + ++  +++E AL +C   + +D +L++LK HRSDWK AL +F WVSKGG+ 
Sbjct: 51  KVQNVLKNYRDSPTRKIELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGGKV 110

Query: 103 KMYSPGSSVYNEMIDILGRMKRFMELGEVFDEMS 2
            M   GS  YNE++DILG+M+RF EL +V D MS
Sbjct: 111 LM---GSGAYNEILDILGKMRRFDELSQVLDIMS 141


>ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
           gi|449502917|ref|XP_004161779.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
          Length = 532

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/94 (46%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280 VQSILQVHMNNSVKEVEKALDRCGLVLNDDFVLELLKWHRSDWKSALRYFYWVSK-GGRK 104
           VQ++L    +  V+++E+AL  C LVL DDFVL++L+ HRSDW  A  +F WV K G  +
Sbjct: 95  VQNVLYFRRHKPVEDIERALSLCDLVLTDDFVLKVLRRHRSDWNPAFIFFNWVLKRGTNE 154

Query: 103 KMYSPGSSVYNEMIDILGRMKRFMELGEVFDEMS 2
           + ++PGS +YNE++ ILG+ +RF E+ +V  EMS
Sbjct: 155 EKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMS 188