BLASTX nr result
ID: Coptis24_contig00031629
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031629 (313 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera] 108 3e-22 emb|CBI20261.3| unnamed protein product [Vitis vinifera] 108 6e-22 ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat... 108 6e-22 ref|XP_002532249.1| pentatricopeptide repeat-containing protein,... 95 5e-18 ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat... 92 3e-17 >emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera] Length = 546 Score = 108 bits (271), Expect = 3e-22 Identities = 50/94 (53%), Positives = 71/94 (75%) Frame = -1 Query: 283 EVQSILQVHMNNSVKEVEKALDRCGLVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 104 EVQ++L+ + ++SV E+E AL +C L L DD VL++LK HRSDW+ A +F W S+ G + Sbjct: 89 EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGXE 148 Query: 103 KMYSPGSSVYNEMIDILGRMKRFMELGEVFDEMS 2 YSPG V+NE++DILGRM+RF E+ ++FDEMS Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182 >emb|CBI20261.3| unnamed protein product [Vitis vinifera] Length = 509 Score = 108 bits (269), Expect = 6e-22 Identities = 50/94 (53%), Positives = 71/94 (75%) Frame = -1 Query: 283 EVQSILQVHMNNSVKEVEKALDRCGLVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 104 EVQ++L+ + ++SV E+E AL +C L L DD VL++LK HRSDW+ A +F W S+ G + Sbjct: 89 EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIE 148 Query: 103 KMYSPGSSVYNEMIDILGRMKRFMELGEVFDEMS 2 YSPG V+NE++DILGRM+RF E+ ++FDEMS Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182 >ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200-like [Vitis vinifera] Length = 546 Score = 108 bits (269), Expect = 6e-22 Identities = 50/94 (53%), Positives = 71/94 (75%) Frame = -1 Query: 283 EVQSILQVHMNNSVKEVEKALDRCGLVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 104 EVQ++L+ + ++SV E+E AL +C L L DD VL++LK HRSDW+ A +F W S+ G + Sbjct: 89 EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIE 148 Query: 103 KMYSPGSSVYNEMIDILGRMKRFMELGEVFDEMS 2 YSPG V+NE++DILGRM+RF E+ ++FDEMS Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182 >ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 507 Score = 95.1 bits (235), Expect = 5e-18 Identities = 45/94 (47%), Positives = 68/94 (72%) Frame = -1 Query: 283 EVQSILQVHMNNSVKEVEKALDRCGLVLNDDFVLELLKWHRSDWKSALRYFYWVSKGGRK 104 +VQ++L+ + ++ +++E AL +C + +D +L++LK HRSDWK AL +F WVSKGG+ Sbjct: 51 KVQNVLKNYRDSPTRKIELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGGKV 110 Query: 103 KMYSPGSSVYNEMIDILGRMKRFMELGEVFDEMS 2 M GS YNE++DILG+M+RF EL +V D MS Sbjct: 111 LM---GSGAYNEILDILGKMRRFDELSQVLDIMS 141 >ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200-like [Cucumis sativus] gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200-like [Cucumis sativus] Length = 532 Score = 92.4 bits (228), Expect = 3e-17 Identities = 44/94 (46%), Positives = 66/94 (70%), Gaps = 1/94 (1%) Frame = -1 Query: 280 VQSILQVHMNNSVKEVEKALDRCGLVLNDDFVLELLKWHRSDWKSALRYFYWVSK-GGRK 104 VQ++L + V+++E+AL C LVL DDFVL++L+ HRSDW A +F WV K G + Sbjct: 95 VQNVLYFRRHKPVEDIERALSLCDLVLTDDFVLKVLRRHRSDWNPAFIFFNWVLKRGTNE 154 Query: 103 KMYSPGSSVYNEMIDILGRMKRFMELGEVFDEMS 2 + ++PGS +YNE++ ILG+ +RF E+ +V EMS Sbjct: 155 EKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMS 188