BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031627
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitoch...    62   5e-08
ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|1...    60   2e-07
ref|XP_002889667.1| ribosomal protein L29 family protein [Arabid...    59   3e-07
ref|NP_172261.1| ribosomal protein L29 family protein [Arabidops...    59   3e-07
ref|XP_002511442.1| structural constituent of ribosome, putative...    58   7e-07

>ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 1
           [Vitis vinifera] gi|225457112|ref|XP_002283459.1|
           PREDICTED: 39S ribosomal protein L47, mitochondrial
           isoform 2 [Vitis vinifera] gi|297733826|emb|CBI15073.3|
           unnamed protein product [Vitis vinifera]
          Length = 140

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +2

Query: 161 YNPLEAFFEADRSQEEEKPVVYGRGWKASEL 253
           YNPLE FFEADRS +E+KPVVYGRGWKASEL
Sbjct: 31  YNPLEEFFEADRSPDEDKPVVYGRGWKASEL 61


>ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|118483659|gb|ABK93723.1|
           unknown [Populus trichocarpa]
           gi|222861024|gb|EEE98566.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +2

Query: 161 YNPLEAFFEADRSQEEEKPVVYGRGWKASEL 253
           +NPLE FFEADRSQ+E+KP+VYGR WKASEL
Sbjct: 33  HNPLEEFFEADRSQDEDKPIVYGRSWKASEL 63


>ref|XP_002889667.1| ribosomal protein L29 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297335509|gb|EFH65926.1| ribosomal protein
           L29 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 143

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +2

Query: 164 NPLEAFFEADRSQEEEKPVVYGRGWKASEL 253
           NPLE FFE DRSQ+E+KPVVYGRGWKASEL
Sbjct: 35  NPLEEFFEFDRSQDEDKPVVYGRGWKASEL 64


>ref|NP_172261.1| ribosomal protein L29 family protein [Arabidopsis thaliana]
           gi|14030695|gb|AAK53022.1|AF375438_1 At1g07830/F24B9_7
           [Arabidopsis thaliana] gi|19548071|gb|AAL87399.1|
           At1g07830/F24B9_7 [Arabidopsis thaliana]
           gi|332190068|gb|AEE28189.1| ribosomal protein L29 family
           protein [Arabidopsis thaliana]
          Length = 144

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +2

Query: 164 NPLEAFFEADRSQEEEKPVVYGRGWKASEL 253
           NPLE FFE DRSQ+E+KPVVYGRGWKASEL
Sbjct: 36  NPLEEFFEFDRSQDEDKPVVYGRGWKASEL 65


>ref|XP_002511442.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223550557|gb|EEF52044.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 163

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = +2

Query: 164 NPLEAFFEADRSQEEEKPVVYGRGWKASEL 253
           NPLE FFEADRSQ+E KPVVYGR WKASEL
Sbjct: 35  NPLEEFFEADRSQDEAKPVVYGRSWKASEL 64