BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031626
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   122   4e-26
ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus c...   102   4e-20
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...    96   3e-18
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    93   3e-17
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    89   3e-16

>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  122 bits (305), Expect = 4e-26
 Identities = 67/155 (43%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
 Frame = -1

Query: 452 ELFRTMPLPPIPVGREERRVDYLGASRDHLYLIQRFDYGNKLY-ILDMERDYSCWKVRYE 276
           E   +MP  P      +RR  Y G S  HL+LI+ +      + + +ME+DYS W++RY 
Sbjct: 236 ECISSMPKLPFSYEWGKRRFRYFGESDGHLHLIEIYGLRTTQFNVYEMEKDYSFWRIRYR 295

Query: 275 MNLTTITTAYPEMIRHYLGTLDWNYYAFSVLLVQGE--TETPCVLLHVPGKIILYNHKDE 102
           + L  +  A+PEM+R YL   D NYYAF VL +  E  TE   +LLH+PGK+I YN K++
Sbjct: 296 VQLDHVVAAFPEMVRSYLDAGDSNYYAFVVLSLVEEDATEESSLLLHIPGKVISYNLKNK 355

Query: 101 TFETLREFS--TGVHETGPFLQYAWFDSYPYIETL 3
           TF+ + E S  TG   T   LQ+ W D+Y YIETL
Sbjct: 356 TFKKVCELSYGTGGSRTKESLQFGWLDAYQYIETL 390


>ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus communis]
           gi|223550115|gb|EEF51602.1| hypothetical protein
           RCOM_1501190 [Ricinus communis]
          Length = 332

 Score =  102 bits (253), Expect = 4e-20
 Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
 Frame = -1

Query: 452 ELFRTMPLPPIPVGREERRVDYLGASRDHLYLIQRFDYG-NKLYILDMERDYSCWKVRYE 276
           E  R MP+PPIP     RRV Y G S  HL LI+ + +   +  + ++ +DYS W V+Y 
Sbjct: 174 EQIREMPMPPIPDDWYRRRVIYFGESGGHLNLIEIYHHAATQFNVCELAKDYSGWFVKYR 233

Query: 275 MNLTTITTAYPEMIRHYLGTLDWNYYAFSV-LLVQGET-ETPCVLLHVPGKIILYNHKDE 102
           + L  +  A+PEMI+        NYYA+ +  +V+GE+ E   ++LH+P KII YN K +
Sbjct: 234 IELEEVIIAFPEMIKTQFEPTVLNYYAYEIWCIVRGESDENSYMVLHMPAKIIRYNLKGK 293

Query: 101 TFETLREF-----STGVHETGPFLQYAWFDSYPYIETL 3
           +F+ L +F     +TG HE    + + W ++Y YI +L
Sbjct: 294 SFKKLCDFPPDSGATGFHEDA--MNFRWGNAYTYIRSL 329


>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
           gi|222864409|gb|EEF01540.1| f-box family protein
           [Populus trichocarpa]
          Length = 406

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
 Frame = -1

Query: 452 ELFRTMPLPPIPVGREERRVDYLGASRDHLYLIQRFDYGNKLY-ILDMERDYSCWKVRYE 276
           E   TMP+PPIP GR ERR+ Y G S  HL LI+ +      + ++ ME DYS W VRY 
Sbjct: 249 ERMLTMPMPPIPEGRSERRLGYFGESGGHLCLIEIYGPITTCFDVMRMESDYSGWSVRYR 308

Query: 275 MNLTTITTAYPEMIRHYLGTLDWNYYAFSVLLVQ-----GETETPCVLLHVPGKIILYNH 111
           ++L+ I +++P M R+     D + Y FS+L +      GE E+  + LH+PG  I YN 
Sbjct: 309 VDLSRIASSFPSMARN--NVQDIHRYLFSILHLADRSQVGEDES-SMWLHIPGTFISYNL 365

Query: 110 KDETFETLREFSTGVH--ETGPFLQYAWFDSYPYIETL 3
           KD  +  L+     ++  E G  L ++W   +PY  TL
Sbjct: 366 KDGKWSKLQSILHQINKIEEGMGLWHSWEGVHPYTNTL 403


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 8/152 (5%)
 Frame = -1

Query: 434 PLPPIPVGREERRVDYLGASRDHLYLIQRFDYGNKLYIL-DMERDYSCWKVRYEMNLTTI 258
           P PP P G  +RR+ + G S  HL++I+ +      +++ +MERDYS W VR+ ++L  +
Sbjct: 261 PPPPGPGGWGKRRIRHFGESGGHLHIIEIYGPRTTQFVVYEMERDYSNWGVRFSVDLDKV 320

Query: 257 TTAYPEMIRHYLGTLDWNYYAFSVLLV---QGETETPCVLLHVPGKIILYNHKDETFETL 87
             A+PE+ ++YL   D  YYA++VL +    G  E   +LL + GKII YN KD +F+ +
Sbjct: 321 IAAFPEITQNYLDAHDLYYYAYNVLCLIRGGGNEEDFSLLLQIRGKIICYNIKDGSFKNV 380

Query: 86  REFSTGVHETGPFLQ----YAWFDSYPYIETL 3
            + + G     P ++        ++YPY+ETL
Sbjct: 381 YDVAHGNPPALPPVKASSLIGCLEAYPYMETL 412


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
 Frame = -1

Query: 452 ELFRTMPLPPIPVGREERRVDYLGASRDHLYLIQRFDYGNKLY-ILDMERDYSCWKVRYE 276
           EL R MP+PP+P    ER +   G S  HL+L++ ++     + + +MERD+S W V++ 
Sbjct: 228 ELVREMPMPPVPDDSNERGIRCFGESCGHLHLVEIYESSTTQFNVYEMERDHSGWFVKFR 287

Query: 275 MNLTTITTAYPEMIRHYLGTLDWNYYAFSVL-LVQGETETPCVL-LHVPGKIILYNHKDE 102
           ++L  +  A+P +I  Y    D+  Y+FSVL +V+ E E    L LH+PGK+I YN   +
Sbjct: 288 VDLNGVALAFPGIIEGYHEEYDY-MYSFSVLCIVRREKEEDSFLALHIPGKVIGYNFSSK 346

Query: 101 TFETLREFSTGVHETGPFLQYAWFDSYPYIETL 3
           +++T         +T   L + W  ++ YIE+L
Sbjct: 347 SYQT--------SDTDCPLAFGWSYAFQYIESL 371