BLASTX nr result

ID: Coptis24_contig00031579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031579
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437269.1| hypothetical protein SORBIDRAFT_10g023910 [S...    60   2e-07

>ref|XP_002437269.1| hypothetical protein SORBIDRAFT_10g023910 [Sorghum bicolor]
           gi|241915492|gb|EER88636.1| hypothetical protein
           SORBIDRAFT_10g023910 [Sorghum bicolor]
          Length = 594

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/86 (39%), Positives = 49/86 (56%)
 Frame = -3

Query: 369 GERTACNGSNLFTTSRPSCSIEGGNLSVFTRDDINNRFGDCRSYISRSPARRPKESYFDM 190
           GE T C+ SN  T+SR S S      SV ++D +  +FG+     S  P      S F +
Sbjct: 498 GESTRCSTSNQTTSSRGSWSPGDHATSVASKDRLLTKFGEVGICRSICPDYVRTLSSFHI 557

Query: 189 DEYLHIQRGEELVLEVWRQRKHISSG 112
           D+YLH+++ E+L+LE WRQ+  I SG
Sbjct: 558 DDYLHLRQSEDLLLETWRQKHRIDSG 583


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