BLASTX nr result

ID: Coptis24_contig00031560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031560
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270311.2| PREDICTED: uncharacterized protein LOC100242...    61   1e-07
ref|XP_003535550.1| PREDICTED: uncharacterized protein LOC100815...    61   1e-07
emb|CBI38138.3| unnamed protein product [Vitis vinifera]               61   1e-07
emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera]    61   1e-07
ref|XP_002327220.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002270311.2| PREDICTED: uncharacterized protein LOC100242669 [Vitis vinifera]
          Length = 1601

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -1

Query: 391  DYKKRFRKFMSLHFISVPGHWCPETSAGPCKCCGDR--SNSFQLK 263
            +YKKRFRKFMS +F SVP HWC + S+ PC+ CG R   +S QLK
Sbjct: 1545 EYKKRFRKFMSTYFFSVPDHWCSQRSSNPCELCGIREDESSSQLK 1589


>ref|XP_003535550.1| PREDICTED: uncharacterized protein LOC100815340 [Glycine max]
          Length = 1541

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = -1

Query: 391  DYKKRFRKFMSLHFISVPGHWCPETSAGPCKCCG 290
            +YKKRFRKFMS +F+SVP HWC + S+ PCK CG
Sbjct: 1497 EYKKRFRKFMSTYFLSVPDHWCSQKSSNPCKLCG 1530


>emb|CBI38138.3| unnamed protein product [Vitis vinifera]
          Length = 1310

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -1

Query: 391  DYKKRFRKFMSLHFISVPGHWCPETSAGPCKCCGDR--SNSFQLK 263
            +YKKRFRKFMS +F SVP HWC + S+ PC+ CG R   +S QLK
Sbjct: 1254 EYKKRFRKFMSTYFFSVPDHWCSQRSSNPCELCGIREDESSSQLK 1298


>emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera]
          Length = 1517

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -1

Query: 391  DYKKRFRKFMSLHFISVPGHWCPETSAGPCKCCGDR--SNSFQLK 263
            +YKKRFRKFMS +F SVP HWC + S+ PC+ CG R   +S QLK
Sbjct: 1461 EYKKRFRKFMSTYFFSVPDHWCSQRSSNPCELCGIREDESSSQLK 1505


>ref|XP_002327220.1| predicted protein [Populus trichocarpa] gi|222835590|gb|EEE74025.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 21/35 (60%), Positives = 31/35 (88%)
 Frame = -1

Query: 394 VDYKKRFRKFMSLHFISVPGHWCPETSAGPCKCCG 290
           ++YKKRFRKFM++HF+SVP +WC ++S+ PC+ CG
Sbjct: 694 IEYKKRFRKFMTVHFLSVPDNWCSQSSSNPCELCG 728


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