BLASTX nr result

ID: Coptis24_contig00031556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031556
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]    77   8e-22
emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]    78   1e-21
ref|XP_002273591.2| PREDICTED: uncharacterized protein LOC100254...    78   2e-21
emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]    77   2e-21
emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]    78   2e-21

>emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]
          Length = 1532

 Score = 77.0 bits (188), Expect(2) = 8e-22
 Identities = 42/90 (46%), Positives = 53/90 (58%)
 Frame = +3

Query: 174 GSICVLWDKDKVEVSDSLMGSFSMSVVCKFGGEFESCLVTAVYGPSNRESSALFWGELDD 353
           G I V+WD  K+   + ++GSFS+SV     G  E   ++AVYGP++      FW EL D
Sbjct: 574 GGILVIWDSKKLLSEEVVLGSFSVSVKFAMDGS-EQFWLSAVYGPNSTALRKDFWVELSD 632

Query: 354 VFAFSRRLPWCVGGDFNVIRFSHEKKGGSR 443
           +F  S    WCVGGDFNVIR   EK GG R
Sbjct: 633 IFGLSSPC-WCVGGDFNVIRRCSEKLGGGR 661



 Score = 51.6 bits (122), Expect(2) = 8e-22
 Identities = 23/55 (41%), Positives = 34/55 (61%)
 Frame = +1

Query: 1   GDDRKRPSIKEGIKKERPNMVLLQETKLQSFSVRYAREVWGKNNIEWVELPAVGA 165
           G  +KR  +K+ ++ E+P++V++QETK      R+   VW   N EWV LPA GA
Sbjct: 518 GSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSVWTARNKEWVVLPACGA 572


>emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]
          Length = 1765

 Score = 78.2 bits (191), Expect(2) = 1e-21
 Identities = 42/90 (46%), Positives = 53/90 (58%)
 Frame = +3

Query: 174 GSICVLWDKDKVEVSDSLMGSFSMSVVCKFGGEFESCLVTAVYGPSNRESSALFWGELDD 353
           G I V+WD  K+   + ++GSFS+SV     G  E   ++AVYGP++      FW EL D
Sbjct: 179 GGILVIWDSKKLHSEEVVLGSFSVSVKFAVDGS-EQFWJSAVYGPNSTALRKDFWVELSD 237

Query: 354 VFAFSRRLPWCVGGDFNVIRFSHEKKGGSR 443
           +F  S    WCVGGDFNVIR   EK GG R
Sbjct: 238 IFGLSSPC-WCVGGDFNVIRRCSEKLGGGR 266



 Score = 50.1 bits (118), Expect(2) = 1e-21
 Identities = 22/55 (40%), Positives = 33/55 (60%)
 Frame = +1

Query: 1   GDDRKRPSIKEGIKKERPNMVLLQETKLQSFSVRYAREVWGKNNIEWVELPAVGA 165
           G  +KR  +K+ ++ E+P++V++QETK      R+   VW   N EW  LPA GA
Sbjct: 123 GSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSVWTARNKEWAVLPACGA 177


>ref|XP_002273591.2| PREDICTED: uncharacterized protein LOC100254784 [Vitis vinifera]
          Length = 2201

 Score = 78.2 bits (191), Expect(2) = 2e-21
 Identities = 42/90 (46%), Positives = 53/90 (58%)
 Frame = +3

Query: 174  GSICVLWDKDKVEVSDSLMGSFSMSVVCKFGGEFESCLVTAVYGPSNRESSALFWGELDD 353
            G I V+WD  K+   + ++GSFS+SV     G  E   ++AVYGP++      FW EL D
Sbjct: 1406 GGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGS-EQFWLSAVYGPNSTALRKDFWEELSD 1464

Query: 354  VFAFSRRLPWCVGGDFNVIRFSHEKKGGSR 443
            +F  S    WCVGGDFNVIR   EK GG R
Sbjct: 1465 IFGLSSPC-WCVGGDFNVIRRCSEKLGGGR 1493



 Score = 48.9 bits (115), Expect(2) = 2e-21
 Identities = 21/55 (38%), Positives = 33/55 (60%)
 Frame = +1

Query: 1    GDDRKRPSIKEGIKKERPNMVLLQETKLQSFSVRYAREVWGKNNIEWVELPAVGA 165
            G  +KR  +K+ ++ E+P++V++QETK      R+   +W   N EW  LPA GA
Sbjct: 1350 GSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSLWTARNKEWAVLPACGA 1404


>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 77.0 bits (188), Expect(2) = 2e-21
 Identities = 41/90 (45%), Positives = 54/90 (60%)
 Frame = +3

Query: 174  GSICVLWDKDKVEVSDSLMGSFSMSVVCKFGGEFESCLVTAVYGPSNRESSALFWGELDD 353
            G I ++WD  K+   + ++GSFS+S+     G  ES  ++AVYGP+N       W EL D
Sbjct: 897  GGILIIWDTKKLSREEVMLGSFSVSIKFTLNG-CESLWLSAVYGPNNSALRKDLWVELSD 955

Query: 354  VFAFSRRLPWCVGGDFNVIRFSHEKKGGSR 443
            +   +    WCVGGDFNVIR S EK GGSR
Sbjct: 956  IAGLASPR-WCVGGDFNVIRRSSEKLGGSR 984



 Score = 50.1 bits (118), Expect(2) = 2e-21
 Identities = 21/55 (38%), Positives = 33/55 (60%)
 Frame = +1

Query: 1    GDDRKRPSIKEGIKKERPNMVLLQETKLQSFSVRYAREVWGKNNIEWVELPAVGA 165
            G  +KR  +K+ ++ E+P++V+ QETK +    R+   VW   N +W  LPA GA
Sbjct: 841  GSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACGA 895


>emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]
          Length = 1802

 Score = 78.2 bits (191), Expect(2) = 2e-21
 Identities = 42/90 (46%), Positives = 53/90 (58%)
 Frame = +3

Query: 174  GSICVLWDKDKVEVSDSLMGSFSMSVVCKFGGEFESCLVTAVYGPSNRESSALFWGELDD 353
            G I V+WD  K+   + ++GSFS+SV     G  E   ++AVYGP++      FW EL D
Sbjct: 847  GGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGS-EQFWLSAVYGPNSTALRKDFWEELSD 905

Query: 354  VFAFSRRLPWCVGGDFNVIRFSHEKKGGSR 443
            +F  S    WCVGGDFNVIR   EK GG R
Sbjct: 906  IFGLSSPC-WCVGGDFNVIRRCSEKLGGGR 934



 Score = 48.9 bits (115), Expect(2) = 2e-21
 Identities = 21/55 (38%), Positives = 33/55 (60%)
 Frame = +1

Query: 1   GDDRKRPSIKEGIKKERPNMVLLQETKLQSFSVRYAREVWGKNNIEWVELPAVGA 165
           G  +KR  +K+ ++ E+P++V++QETK      R+   +W   N EW  LPA GA
Sbjct: 791 GSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSLWTARNKEWAVLPACGA 845


Top