BLASTX nr result

ID: Coptis24_contig00031553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031553
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX46384.1| isochorismate synthase [Populus tremuloides]            99   5e-19
gb|ACX46383.1| isochorismate synthase [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002317989.1| isochorismate synthase [Populus trichocarpa]...    97   2e-18
gb|ACZ50508.1| isochorismate synthase [Populus fremontii x Popul...    96   2e-18
ref|XP_002267681.2| PREDICTED: isochorismate synthase 2, chlorop...    95   5e-18

>gb|ACX46384.1| isochorismate synthase [Populus tremuloides]
          Length = 572

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/95 (55%), Positives = 59/95 (62%)
 Frame = -2

Query: 286 SGRDENKLLDPFLEPTNGVCSISTTNPVSXXXXXXXXXXXQSHSFSLQDWKCIKRFLSED 107
           SGR ++K    F E TNG     + N VS             H F   DWK IKRFLS +
Sbjct: 136 SGRRQSK---DFTEVTNGNGYQKSNNVVSVAGVGSAVLFRNDHPFCYNDWKSIKRFLSAN 192

Query: 106 CPLIRAYGAIRFDARSNISFEWEGFGSFYFMVPLV 2
           CPLIRAYGAIRFDARSNIS EWE FGSFYF++P V
Sbjct: 193 CPLIRAYGAIRFDARSNISSEWEPFGSFYFIIPQV 227


>gb|ACX46383.1| isochorismate synthase [Populus trichocarpa]
           gi|269851435|gb|ACZ50509.1| isochorismate synthase
           [Populus fremontii x Populus angustifolia]
           gi|269851437|gb|ACZ50510.1| isochorismate synthase
           [Populus fremontii x Populus angustifolia]
          Length = 572

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/95 (54%), Positives = 59/95 (62%)
 Frame = -2

Query: 286 SGRDENKLLDPFLEPTNGVCSISTTNPVSXXXXXXXXXXXQSHSFSLQDWKCIKRFLSED 107
           SGR ++K    F E TNG     + N VS             H F   DWK IKRFLS +
Sbjct: 136 SGRRQSK---DFTEVTNGNGYQKSNNVVSVAGVGSAVLFRDVHPFCYNDWKSIKRFLSAN 192

Query: 106 CPLIRAYGAIRFDARSNISFEWEGFGSFYFMVPLV 2
           CPLIRAYGAIRFDAR+NIS EWE FGSFYF++P V
Sbjct: 193 CPLIRAYGAIRFDARANISSEWEPFGSFYFVIPQV 227


>ref|XP_002317989.1| isochorismate synthase [Populus trichocarpa]
           gi|222858662|gb|EEE96209.1| isochorismate synthase
           [Populus trichocarpa]
          Length = 572

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/95 (54%), Positives = 59/95 (62%)
 Frame = -2

Query: 286 SGRDENKLLDPFLEPTNGVCSISTTNPVSXXXXXXXXXXXQSHSFSLQDWKCIKRFLSED 107
           SGR ++K    F E TNG     + N VS             H F   DWK IKRFLS +
Sbjct: 136 SGRRQSK---DFTEVTNGNGYQKSNNVVSVAGVGSAVLFRDVHPFCYNDWKSIKRFLSAN 192

Query: 106 CPLIRAYGAIRFDARSNISFEWEGFGSFYFMVPLV 2
           CPLIRAYGAIRFDAR+NIS EWE FGSFYF++P V
Sbjct: 193 CPLIRAYGAIRFDARANISSEWEPFGSFYFVIPQV 227


>gb|ACZ50508.1| isochorismate synthase [Populus fremontii x Populus angustifolia]
          Length = 572

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/95 (54%), Positives = 59/95 (62%)
 Frame = -2

Query: 286 SGRDENKLLDPFLEPTNGVCSISTTNPVSXXXXXXXXXXXQSHSFSLQDWKCIKRFLSED 107
           SGR ++K    F E TNG     + N VS             H F   DWK IKRFLS +
Sbjct: 136 SGRRQSK---DFTEVTNGNGYQKSNNLVSVAAVGSAVLFRDVHPFCYNDWKSIKRFLSAN 192

Query: 106 CPLIRAYGAIRFDARSNISFEWEGFGSFYFMVPLV 2
           CPLIRAYGAIRFDAR+NIS EWE FGSFYF++P V
Sbjct: 193 CPLIRAYGAIRFDARANISSEWEPFGSFYFVIPQV 227


>ref|XP_002267681.2| PREDICTED: isochorismate synthase 2, chloroplastic [Vitis vinifera]
          Length = 560

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/96 (50%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
 Frame = -2

Query: 286 SGRDENKLLDPFLEPTNGVCS-ISTTNPVSXXXXXXXXXXXQSHSFSLQDWKCIKRFLSE 110
           S R ++   DPF++  NG  + +   + V              H FSL DWK IKRFLS+
Sbjct: 130 SSRSQSSSFDPFIDSVNGDGNGLEDHDLVRVAGIGAAVFFRHIHPFSLDDWKSIKRFLSK 189

Query: 109 DCPLIRAYGAIRFDARSNISFEWEGFGSFYFMVPLV 2
            CPLIRAYGAIRFD R+N+S EW  FGSFYF+VP V
Sbjct: 190 KCPLIRAYGAIRFDPRANVSSEWRAFGSFYFVVPQV 225


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