BLASTX nr result

ID: Coptis24_contig00031550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031550
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283295.1| PREDICTED: uncharacterized protein LOC100242...    77   2e-12
emb|CBI19416.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_004171185.1| PREDICTED: uncharacterized LOC101215899 [Cuc...    58   7e-07
ref|XP_004136940.1| PREDICTED: uncharacterized protein LOC101215...    58   7e-07
ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242...    58   7e-07

>ref|XP_002283295.1| PREDICTED: uncharacterized protein LOC100242050 [Vitis vinifera]
          Length = 743

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
 Frame = +3

Query: 3   KPIDQHRWPGRTRQQQPMDSLTRSLDCTN---KVVGSASVSRVFNQSLIDLSRRASFDGR 173
           KP+DQHRWPGR+RQ   ++SLTRS+DCT+   K+ GS  ++R   QS+ID   R   DGR
Sbjct: 287 KPVDQHRWPGRSRQ---VNSLTRSMDCTDEKKKLGGSGIMARSLQQSMIDERNRTPLDGR 343

Query: 174 LNPKFGRGEISKTVHLSIGANSSYGS 251
           LN   G  E+ K   L + ANS  GS
Sbjct: 344 LNLDSGNAELGKANEL-VNANSVVGS 368


>emb|CBI19416.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   KPIDQHRWPGRTRQQQPMDSLTRSLDCTN---KVVGSASVSRVFNQSLIDLSRRASFDGR 173
           KP+DQHRWPGR+RQ   ++SLTRS+DCT+   K+ GS  ++R   QS+ID   R   DGR
Sbjct: 187 KPVDQHRWPGRSRQ---VNSLTRSMDCTDEKKKLGGSGIMARSLQQSMIDERNRTPLDGR 243

Query: 174 LNPKFGRGEISKTVHLSIGANSSYG 248
           LN   G  + S       G   + G
Sbjct: 244 LNLDSGNADTSGAQESGGGGGGTQG 268


>ref|XP_004171185.1| PREDICTED: uncharacterized LOC101215899 [Cucumis sativus]
          Length = 514

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
 Frame = +3

Query: 3   KPIDQHRWPGRTRQQQ-PMDSLTRSLDCTNKV-----VGSASVSRVFNQSLIDLSRRASF 164
           K +DQHRWP R R      + L+RS DC  +      +GS  V R   Q++ D SRRASF
Sbjct: 210 KLLDQHRWPARNRHANLEGNPLSRSFDCGGEQKKVNGIGSGMVVRALQQTISDDSRRASF 269

Query: 165 DGRLNPKFGRGEISKTVHLSIGANS 239
           DGRL+      E+ K V  +  A+S
Sbjct: 270 DGRLSLDLNSSELIKAVRQNPDADS 294


>ref|XP_004136940.1| PREDICTED: uncharacterized protein LOC101215899 [Cucumis sativus]
          Length = 667

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
 Frame = +3

Query: 3   KPIDQHRWPGRTRQQQ-PMDSLTRSLDCTNKV-----VGSASVSRVFNQSLIDLSRRASF 164
           K +DQHRWP R R      + L+RS DC  +      +GS  V R   Q++ D SRRASF
Sbjct: 210 KLLDQHRWPARNRHANLEGNPLSRSFDCGGEQKKVNGIGSGMVVRALQQTISDDSRRASF 269

Query: 165 DGRLNPKFGRGEISKTVHLSIGANS 239
           DGRL+      E+ K V  +  A+S
Sbjct: 270 DGRLSLDLNSSELIKAVRQNPDADS 294


>ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242868 [Vitis vinifera]
          Length = 639

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
 Frame = +3

Query: 24  WPGRTRQQQPMDSLTRSLDCT---NKVVGSASVSRVFNQSLIDLSRRASFDGRLNPKFGR 194
           WPGR+R    ++ L RS DC+    K +GS  V   F QS+ID SRRASFDGRL+   G 
Sbjct: 191 WPGRSRS---VNVLARSFDCSVDRKKSIGSGIVVGSFQQSMIDESRRASFDGRLSLDLGN 247

Query: 195 GEISKTVHLSIGANSSYGS 251
            E+ K        NS+  S
Sbjct: 248 AELLKVTKQDPDGNSANDS 266


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