BLASTX nr result

ID: Coptis24_contig00031535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031535
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30773.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002267059.1| PREDICTED: uncharacterized protein LOC100267...    88   8e-16
gb|ACN40624.1| unknown [Picea sitchensis]                              84   1e-14
gb|ABK22481.1| unknown [Picea sitchensis] gi|116787652|gb|ABK245...    84   1e-14
gb|ADE76422.1| unknown [Picea sitchensis]                              83   3e-14

>emb|CBI30773.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/93 (51%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
 Frame = +3

Query: 3   EQEEEMEKNMVIMARELKKLRAELANAKKRARAGTG-----YTGNYGNPEMSYGENTYVD 167
           E  + MEKN++ MARE++KLRAELANA+KRARA        Y G+YGNPE  YG N Y  
Sbjct: 288 EHGQAMEKNLIAMAREMEKLRAELANAEKRARAAAAVGNQIYGGSYGNPETGYGGNPYPA 347

Query: 168 TYGTRQVQGSADGY-EYGSAAVSHAPYDRTRVH 263
            YG    QGSA+G  +YG    S   YD  R H
Sbjct: 348 GYGMNPGQGSAEGVPQYGPGPGSWGTYDMQRAH 380


>ref|XP_002267059.1| PREDICTED: uncharacterized protein LOC100267569 [Vitis vinifera]
           gi|147835469|emb|CAN63248.1| hypothetical protein
           VITISV_022231 [Vitis vinifera]
          Length = 307

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/93 (51%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
 Frame = +3

Query: 3   EQEEEMEKNMVIMARELKKLRAELANAKKRARAGTG-----YTGNYGNPEMSYGENTYVD 167
           E  + MEKN++ MARE++KLRAELANA+KRARA        Y G+YGNPE  YG N Y  
Sbjct: 212 EHGQAMEKNLIAMAREMEKLRAELANAEKRARAAAAVGNQIYGGSYGNPETGYGGNPYPA 271

Query: 168 TYGTRQVQGSADGY-EYGSAAVSHAPYDRTRVH 263
            YG    QGSA+G  +YG    S   YD  R H
Sbjct: 272 GYGMNPGQGSAEGVPQYGPGPGSWGTYDMQRAH 304


>gb|ACN40624.1| unknown [Picea sitchensis]
          Length = 309

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/92 (48%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +3

Query: 3   EQEEEMEKNMVIMARELKKLRAELANAKKRARA----GTGYTGNYGNPEMSYGENTYVDT 170
           EQ + MEKN++ MARE++KLRAELANA KR R     G  Y GNYG  EM Y    Y D 
Sbjct: 215 EQGQAMEKNLISMAREVEKLRAELANADKRGRVAANPGGAYAGNYGGAEMGYSGGAYGDG 274

Query: 171 YGTRQVQGSAD-GYEYGSAAVSHAPYDRTRVH 263
           YG    QG A+ G +YG+ A     Y+  R H
Sbjct: 275 YGVHPAQGGAESGGQYGAGAAPWGAYEMQRSH 306


>gb|ABK22481.1| unknown [Picea sitchensis] gi|116787652|gb|ABK24593.1| unknown
           [Picea sitchensis] gi|116793930|gb|ABK26936.1| unknown
           [Picea sitchensis] gi|224286832|gb|ACN41119.1| unknown
           [Picea sitchensis]
          Length = 309

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/92 (48%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +3

Query: 3   EQEEEMEKNMVIMARELKKLRAELANAKKRARA----GTGYTGNYGNPEMSYGENTYVDT 170
           EQ + MEKN++ MARE++KLRAELANA KR R     G  Y GNYG  EM Y    Y D 
Sbjct: 215 EQGQAMEKNLISMAREVEKLRAELANADKRGRVAANPGGAYAGNYGGAEMGYSGGAYGDG 274

Query: 171 YGTRQVQGSAD-GYEYGSAAVSHAPYDRTRVH 263
           YG    QG A+ G +YG+ A     Y+  R H
Sbjct: 275 YGVHPAQGGAESGGQYGAGAAPWGAYEMQRSH 306


>gb|ADE76422.1| unknown [Picea sitchensis]
          Length = 171

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/92 (48%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
 Frame = +3

Query: 3   EQEEEMEKNMVIMARELKKLRAELANAKKRARA----GTGYTGNYGNPEMSYGENTYVDT 170
           EQ + MEKN++ MARE++KLRAELANA KR R     G  Y GNYG  EM Y    Y D 
Sbjct: 76  EQGQAMEKNLISMAREVEKLRAELANADKRGRVAANPGGAYAGNYGGAEMGYSGGAYGDG 135

Query: 171 YGTRQVQGSAD-GYEYGSAAVSHAPYDRTRVH 263
           YG    QG A+ G +YG+ A     Y   R H
Sbjct: 136 YGVHPAQGGAESGGQYGAGAAPWGAYKMQRSH 167


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