BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031532
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
gb|AFK44336.1| unknown [Lotus japonicus]                               72   5e-11
ref|XP_003611132.1| S-locus F-box protein [Medicago truncatula] ...    72   6e-11
ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    69   5e-10

>ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|222847412|gb|EEE84959.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
 Frame = -3

Query: 370 RIPDDILLDILVRLSLKSLLRCKCVCKHWCSLIRDPTFVQLYLGHVQKESNIAGFSEVIA 191
           ++P DI++DIL  L +KSLLR KCVCK W SLI DP FV+ +L   ++ ++      +++
Sbjct: 3   KLPQDIMVDILTYLPVKSLLRFKCVCKLWHSLISDPKFVKSHLKTAREVNSNKSQRLLLS 62

Query: 190 CRYATSICFYSI---DKDGFATEVLPP----VNDVSSLGAITSCNGLLCFIGKGSRLQAC 32
            R   S+ F +    D+D    E+  P     +    +G + SC+GL+C     ++L   
Sbjct: 63  TRTPQSVDFEAASEGDEDNAVQELEYPDVVRCSPTYFIGIMGSCDGLICLFVDYAKLVLW 122

Query: 31  NPVTRE 14
           NP TR+
Sbjct: 123 NPSTRD 128


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
 Frame = -3

Query: 367 IPDDILLDILVRLSLKSLLRCKCVCKHWCSLIRDPTFVQLYLGHVQKESNIAGFSEVI-- 194
           +PD+++++IL RL +KSLL+ +CVCK W  LI DP F++ +L H+ K+S +     +I  
Sbjct: 63  LPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHL-HLSKQSTLFNHHRIILS 121

Query: 193 --ACRYATSICFYSIDKDGFATEV----LPPVNDVSSLGAITSCNGLLCFIGKGSRLQAC 32
                +    C  S   +  +T       P  N     G + SCNGLLCF  KG  +   
Sbjct: 122 ATTAEFHLKSCSVSSLFNSTSTVCEDLNYPVKNKYRHDGIVGSCNGLLCFAIKGDCVLLW 181

Query: 31  NPVTR 17
           NP  R
Sbjct: 182 NPSIR 186


>ref|XP_003611132.1| S-locus F-box protein [Medicago truncatula]
           gi|355512467|gb|AES94090.1| S-locus F-box protein
           [Medicago truncatula]
          Length = 464

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
 Frame = -3

Query: 367 IPDDILLDILVRLSLKSLLRCKCVCKHWCSLIRDPTFVQLYLGHVQKESN----IAGFSE 200
           +P  +  +IL++L +KSLL C+CVCK W +LI +P F +L     +  +N    +    E
Sbjct: 34  LPFHLTTEILLKLPIKSLLICRCVCKIWNTLISEPKFAKLQFERFEFGTNNLVKLKPIFE 93

Query: 199 VIACRYATS-----ICFYSIDKDGFATEVLPPVNDVSSLGAITSCNGLLCF--IGKGSRL 41
           +  C   +S     +  Y + K+      +   +     G + SCNGLLC      GS L
Sbjct: 94  LPLCDDISSMDKNDVKLYKVIKNKSKKRYITCTSSTDKFGIVNSCNGLLCLSETSTGSPL 153

Query: 40  QACNPVTRE 14
             CNPVTRE
Sbjct: 154 AICNPVTRE 162


>ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|222839290|gb|EEE77627.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
 Frame = -3

Query: 370 RIPDDILLDILVRLSLKSLLRCKCVCKHWCSLIRDPTFVQLYLGHVQKESNIAGFSEVIA 191
           ++P +I++DIL  L  KSL++ KCVC+ W SLI DP F +L+L    ++ NI     +IA
Sbjct: 3   KLPQEIIVDILTYLPAKSLIKFKCVCRSWRSLISDPQFAKLHLKRAHEDENINRQRLLIA 62

Query: 190 CRYATSICFYSI-DKDGFATEV------LPPVNDVSSLGA-ITSCNGLLCFIGKGSRLQA 35
                S+ F +  D D   T V          ND  ++G  + SC+G++C + +   +  
Sbjct: 63  ADPLYSVDFEAASDGDNGNTLVKLSYPNAESHNDSFAVGLFLGSCDGIVCILNEVDSVVL 122

Query: 34  CNPVTRETLTL 2
            NP TRE+  L
Sbjct: 123 WNPSTRESKKL 133


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
 Frame = -3

Query: 367 IPDDILLDILVRLSLKSLLRCKCVCKHWCSLIRDPTFVQLYLGHVQKESNIAGFSEVI-- 194
           +PD+++++IL RL +KSLL+ +CVCK W SLI DP F++ +L H+   S       +I  
Sbjct: 49  LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHL-HLSSRSTHFTHHRIILS 107

Query: 193 --ACRYATSICFYSIDKDGFAT---EVLPPV-NDVSSLGAITSCNGLLCFIGKGSRLQAC 32
                +    C  S   +  +T   E+  PV N     G + SCNGLLCF  KG  +   
Sbjct: 108 ATTAEFHLKSCSLSSLFNNLSTVCDELNYPVKNKFRHDGIVGSCNGLLCFAIKGDCVLLW 167

Query: 31  NPVTR 17
           NP  R
Sbjct: 168 NPSIR 172