BLASTX nr result

ID: Coptis24_contig00031513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031513
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632136.1| PREDICTED: cell division control protein 6 h...   132   4e-29
emb|CBI15981.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002525621.1| cdc6, putative [Ricinus communis] gi|2235350...   131   5e-29
ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_004143214.1| PREDICTED: cell division control protein 6 h...   122   2e-26

>ref|XP_003632136.1| PREDICTED: cell division control protein 6 homolog [Vitis vinifera]
          Length = 497

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = -2

Query: 253 KSTIVDTIQSLPQHQQIVLCSMVKLFRGTKKDTTVGELNRSYIDLSKSAQIPPAGFLEFS 74
           +S IVDTIQSLPQHQQI+LCS VKLFRG KKDTTVGELN+SY+D+ KS  +PP G LE S
Sbjct: 389 RSPIVDTIQSLPQHQQIILCSAVKLFRGGKKDTTVGELNKSYVDICKSVLVPPIGILELS 448

Query: 73  NMCRVLSDQGIFKMGQSRDDRSKR 2
           +MCRVLSDQG+ K+GQ+R+D+ KR
Sbjct: 449 SMCRVLSDQGLLKLGQAREDKLKR 472


>emb|CBI15981.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = -2

Query: 253 KSTIVDTIQSLPQHQQIVLCSMVKLFRGTKKDTTVGELNRSYIDLSKSAQIPPAGFLEFS 74
           +S IVDTIQSLPQHQQI+LCS VKLFRG KKDTTVGELN+SY+D+ KS  +PP G LE S
Sbjct: 401 RSPIVDTIQSLPQHQQIILCSAVKLFRGGKKDTTVGELNKSYVDICKSVLVPPIGILELS 460

Query: 73  NMCRVLSDQGIFKMGQSRDDRSKR 2
           +MCRVLSDQG+ K+GQ+R+D+ KR
Sbjct: 461 SMCRVLSDQGLLKLGQAREDKLKR 484


>ref|XP_002525621.1| cdc6, putative [Ricinus communis] gi|223535057|gb|EEF36739.1| cdc6,
           putative [Ricinus communis]
          Length = 523

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/84 (70%), Positives = 71/84 (84%)
 Frame = -2

Query: 253 KSTIVDTIQSLPQHQQIVLCSMVKLFRGTKKDTTVGELNRSYIDLSKSAQIPPAGFLEFS 74
           +S +VDTIQSLPQHQQ++LCS VK FRG KKDTT+GELN+SY D+ KS  IPP GFLEF 
Sbjct: 384 RSPVVDTIQSLPQHQQVILCSAVKFFRGGKKDTTIGELNKSYADICKSTMIPPVGFLEFL 443

Query: 73  NMCRVLSDQGIFKMGQSRDDRSKR 2
           NMC VL+DQG+ K+GQSRDD+ +R
Sbjct: 444 NMCTVLNDQGLLKLGQSRDDKLRR 467


>ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|222847075|gb|EEE84622.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/84 (67%), Positives = 71/84 (84%)
 Frame = -2

Query: 253 KSTIVDTIQSLPQHQQIVLCSMVKLFRGTKKDTTVGELNRSYIDLSKSAQIPPAGFLEFS 74
           +S  VDTIQSLPQHQQ++LC+ VK FRG KKDTTVGELN+SY+++ KS  IPP G LEF 
Sbjct: 390 RSPTVDTIQSLPQHQQMILCAAVKFFRGGKKDTTVGELNKSYMEICKSTIIPPVGILEFL 449

Query: 73  NMCRVLSDQGIFKMGQSRDDRSKR 2
           +MCRV++DQG+ K+GQSRDD+ KR
Sbjct: 450 SMCRVVADQGLLKLGQSRDDKLKR 473


>ref|XP_004143214.1| PREDICTED: cell division control protein 6 homolog [Cucumis
           sativus] gi|449520665|ref|XP_004167354.1| PREDICTED:
           cell division control protein 6 homolog [Cucumis
           sativus]
          Length = 500

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/84 (69%), Positives = 71/84 (84%)
 Frame = -2

Query: 253 KSTIVDTIQSLPQHQQIVLCSMVKLFRGTKKDTTVGELNRSYIDLSKSAQIPPAGFLEFS 74
           KS  V+TIQSLPQHQQI+LCS+VKL RG KKDTT+GELN+SYID+ KS  IPP G LE S
Sbjct: 390 KSPAVETIQSLPQHQQIILCSVVKLVRGGKKDTTIGELNKSYIDMCKSTLIPPVGSLELS 449

Query: 73  NMCRVLSDQGIFKMGQSRDDRSKR 2
           NM  VL+DQG+ K+GQSRD++++R
Sbjct: 450 NMFTVLNDQGLLKLGQSRDNKTRR 473


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