BLASTX nr result
ID: Coptis24_contig00031505
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00031505 (796 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_191599.1| Mitochondrial transcription termination factor ... 209 4e-52 ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arab... 204 1e-50 ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244... 199 4e-49 emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera] 199 4e-49 ref|XP_002511611.1| conserved hypothetical protein [Ricinus comm... 195 1e-47 >ref|NP_191599.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gi|7287988|emb|CAB81826.1| putative protein [Arabidopsis thaliana] gi|332646534|gb|AEE80055.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] Length = 558 Score = 209 bits (533), Expect = 4e-52 Identities = 95/164 (57%), Positives = 123/164 (75%) Frame = +1 Query: 4 QSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLGRGVAFSRLSK 183 Q+ R+ +H + KLDFLHEIGFGEN +T+KVL ++HGT EL RF LL G+ FS++ Sbjct: 388 QNSRTKRHNIQKLDFLHEIGFGENGITMKVLQHVHGTAVELHDRFQILLNSGIIFSKICM 447 Query: 184 MIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLNVFPGFLCFDLENRMKPRLRIHKWIL 363 +I+ PK+LNQKP ++DK+ FLC E+G S+ +L VFP +LCFDLENR+ PR R HKW++ Sbjct: 448 LIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLV 507 Query: 364 ENGFHAKEYSLASIIATSENRFIDRLVGIHPTVLKQWFERFSSK 495 E GF K YS+ASI+ATSE FI RL GIHP + K WFERFSS+ Sbjct: 508 EKGFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHWFERFSSR 551 >ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp. lyrata] gi|297322390|gb|EFH52811.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp. lyrata] Length = 560 Score = 204 bits (520), Expect = 1e-50 Identities = 93/164 (56%), Positives = 123/164 (75%) Frame = +1 Query: 4 QSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLGRGVAFSRLSK 183 Q+ R+ H + KLDFLHEIGFGEN +T+KVL ++HGT ELQ RF LL G+ FS++ Sbjct: 388 QNSRTKTHNIQKLDFLHEIGFGENGMTMKVLQHVHGTAVELQDRFQILLDSGIIFSKICL 447 Query: 184 MIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLNVFPGFLCFDLENRMKPRLRIHKWIL 363 +I+ PK+LNQKP ++DK+ FLC E+G S+ +L+VFP +LCFDLENR+ PR R HKW++ Sbjct: 448 LIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLDVFPAYLCFDLENRISPRFRFHKWLV 507 Query: 364 ENGFHAKEYSLASIIATSENRFIDRLVGIHPTVLKQWFERFSSK 495 E G K YS+ASI+ATSE FI RL GIHP + K WFERF+++ Sbjct: 508 EKGLSEKSYSIASIVATSEKAFIARLYGIHPAIPKHWFERFANR 551 >ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244389 [Vitis vinifera] Length = 561 Score = 199 bits (507), Expect = 4e-49 Identities = 97/162 (59%), Positives = 122/162 (75%) Frame = +1 Query: 4 QSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLGRGVAFSRLSK 183 QS R+ H + KL+FLH IG+GENL+T+KVL ++HGT SELQ RFN LL G+ FS+L Sbjct: 395 QSSRTPAHTINKLNFLHGIGYGENLLTMKVLEHVHGTSSELQERFNCLLHAGLEFSKLCT 454 Query: 184 MIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLNVFPGFLCFDLENRMKPRLRIHKWIL 363 MI K+LNQKPE+L+ KV+FL E+G+S+Q+L+VFP +LCF+L+NR+KPR R H W+ Sbjct: 455 MISFSAKILNQKPEILERKVNFLIQEMGLSLQYLDVFPAYLCFNLDNRIKPRYRCHVWLA 514 Query: 364 ENGFHAKEYSLASIIATSENRFIDRLVGIHPTVLKQWFERFS 489 ENG K YSLAS+IATSE FI RL GIHP V K W E FS Sbjct: 515 ENGLCTKNYSLASMIATSEKSFIARLYGIHPAVPKLWLECFS 556 >emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera] Length = 545 Score = 199 bits (507), Expect = 4e-49 Identities = 97/162 (59%), Positives = 122/162 (75%) Frame = +1 Query: 4 QSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLGRGVAFSRLSK 183 QS R+ H + KL+FLH IG+GENL+T+KVL ++HGT SELQ RFN LL G+ FS+L Sbjct: 379 QSSRTPAHTINKLNFLHGIGYGENLLTMKVLEHVHGTSSELQERFNCLLHAGLEFSKLCT 438 Query: 184 MIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLNVFPGFLCFDLENRMKPRLRIHKWIL 363 MI K+LNQKPE+L+ KV+FL E+G+S+Q+L+VFP +LCF+L+NR+KPR R H W+ Sbjct: 439 MISFSAKILNQKPEILERKVNFLIQEMGLSLQYLDVFPAYLCFNLDNRIKPRYRXHVWLA 498 Query: 364 ENGFHAKEYSLASIIATSENRFIDRLVGIHPTVLKQWFERFS 489 ENG K YSLAS+IATSE FI RL GIHP V K W E FS Sbjct: 499 ENGLCTKNYSLASMIATSEKSFIARLYGIHPAVPKLWLECFS 540 >ref|XP_002511611.1| conserved hypothetical protein [Ricinus communis] gi|223548791|gb|EEF50280.1| conserved hypothetical protein [Ricinus communis] Length = 561 Score = 195 bits (495), Expect = 1e-47 Identities = 92/170 (54%), Positives = 124/170 (72%) Frame = +1 Query: 13 RSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLGRGVAFSRLSKMIK 192 R+ H ++KLDF+H IGFGEN +T+KVL++LHG+ SELQ RF+ LL G+ FS+L MI+ Sbjct: 388 RTPTHTMSKLDFVHGIGFGENALTVKVLTHLHGSSSELQERFDCLLRLGIGFSKLCTMIR 447 Query: 193 MLPKVLNQKPELLKDKVDFLCNEVGMSVQFLNVFPGFLCFDLENRMKPRLRIHKWILENG 372 +PK+LNQ+ E+L+ KV+FLC E+G S+Q L +FP FLCF+LENR+KPR R H W+ E G Sbjct: 448 TMPKILNQQSEILEQKVNFLCQEMGSSLQELYIFPAFLCFNLENRIKPRYRFHMWLTEKG 507 Query: 373 FHAKEYSLASIIATSENRFIDRLVGIHPTVLKQWFERFSSKNHFYSPQEP 522 + YS++SI+ATSE F+ RL GIHP V K WFE F P++P Sbjct: 508 VSTQTYSISSIVATSEKNFVARLYGIHPAVPKHWFE-------FLMPKKP 550