BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00031505
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191599.1| Mitochondrial transcription termination factor ...   209   4e-52
ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arab...   204   1e-50
ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244...   199   4e-49
emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]   199   4e-49
ref|XP_002511611.1| conserved hypothetical protein [Ricinus comm...   195   1e-47

>ref|NP_191599.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|7287988|emb|CAB81826.1|
           putative protein [Arabidopsis thaliana]
           gi|332646534|gb|AEE80055.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 558

 Score =  209 bits (533), Expect = 4e-52
 Identities = 95/164 (57%), Positives = 123/164 (75%)
 Frame = +1

Query: 4   QSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLGRGVAFSRLSK 183
           Q+ R+ +H + KLDFLHEIGFGEN +T+KVL ++HGT  EL  RF  LL  G+ FS++  
Sbjct: 388 QNSRTKRHNIQKLDFLHEIGFGENGITMKVLQHVHGTAVELHDRFQILLNSGIIFSKICM 447

Query: 184 MIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLNVFPGFLCFDLENRMKPRLRIHKWIL 363
           +I+  PK+LNQKP  ++DK+ FLC E+G S+ +L VFP +LCFDLENR+ PR R HKW++
Sbjct: 448 LIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLV 507

Query: 364 ENGFHAKEYSLASIIATSENRFIDRLVGIHPTVLKQWFERFSSK 495
           E GF  K YS+ASI+ATSE  FI RL GIHP + K WFERFSS+
Sbjct: 508 EKGFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHWFERFSSR 551


>ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
           lyrata] gi|297322390|gb|EFH52811.1| hypothetical protein
           ARALYDRAFT_907562 [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score =  204 bits (520), Expect = 1e-50
 Identities = 93/164 (56%), Positives = 123/164 (75%)
 Frame = +1

Query: 4   QSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLGRGVAFSRLSK 183
           Q+ R+  H + KLDFLHEIGFGEN +T+KVL ++HGT  ELQ RF  LL  G+ FS++  
Sbjct: 388 QNSRTKTHNIQKLDFLHEIGFGENGMTMKVLQHVHGTAVELQDRFQILLDSGIIFSKICL 447

Query: 184 MIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLNVFPGFLCFDLENRMKPRLRIHKWIL 363
           +I+  PK+LNQKP  ++DK+ FLC E+G S+ +L+VFP +LCFDLENR+ PR R HKW++
Sbjct: 448 LIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLDVFPAYLCFDLENRISPRFRFHKWLV 507

Query: 364 ENGFHAKEYSLASIIATSENRFIDRLVGIHPTVLKQWFERFSSK 495
           E G   K YS+ASI+ATSE  FI RL GIHP + K WFERF+++
Sbjct: 508 EKGLSEKSYSIASIVATSEKAFIARLYGIHPAIPKHWFERFANR 551


>ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244389 [Vitis vinifera]
          Length = 561

 Score =  199 bits (507), Expect = 4e-49
 Identities = 97/162 (59%), Positives = 122/162 (75%)
 Frame = +1

Query: 4   QSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLGRGVAFSRLSK 183
           QS R+  H + KL+FLH IG+GENL+T+KVL ++HGT SELQ RFN LL  G+ FS+L  
Sbjct: 395 QSSRTPAHTINKLNFLHGIGYGENLLTMKVLEHVHGTSSELQERFNCLLHAGLEFSKLCT 454

Query: 184 MIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLNVFPGFLCFDLENRMKPRLRIHKWIL 363
           MI    K+LNQKPE+L+ KV+FL  E+G+S+Q+L+VFP +LCF+L+NR+KPR R H W+ 
Sbjct: 455 MISFSAKILNQKPEILERKVNFLIQEMGLSLQYLDVFPAYLCFNLDNRIKPRYRCHVWLA 514

Query: 364 ENGFHAKEYSLASIIATSENRFIDRLVGIHPTVLKQWFERFS 489
           ENG   K YSLAS+IATSE  FI RL GIHP V K W E FS
Sbjct: 515 ENGLCTKNYSLASMIATSEKSFIARLYGIHPAVPKLWLECFS 556


>emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]
          Length = 545

 Score =  199 bits (507), Expect = 4e-49
 Identities = 97/162 (59%), Positives = 122/162 (75%)
 Frame = +1

Query: 4   QSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLGRGVAFSRLSK 183
           QS R+  H + KL+FLH IG+GENL+T+KVL ++HGT SELQ RFN LL  G+ FS+L  
Sbjct: 379 QSSRTPAHTINKLNFLHGIGYGENLLTMKVLEHVHGTSSELQERFNCLLHAGLEFSKLCT 438

Query: 184 MIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLNVFPGFLCFDLENRMKPRLRIHKWIL 363
           MI    K+LNQKPE+L+ KV+FL  E+G+S+Q+L+VFP +LCF+L+NR+KPR R H W+ 
Sbjct: 439 MISFSAKILNQKPEILERKVNFLIQEMGLSLQYLDVFPAYLCFNLDNRIKPRYRXHVWLA 498

Query: 364 ENGFHAKEYSLASIIATSENRFIDRLVGIHPTVLKQWFERFS 489
           ENG   K YSLAS+IATSE  FI RL GIHP V K W E FS
Sbjct: 499 ENGLCTKNYSLASMIATSEKSFIARLYGIHPAVPKLWLECFS 540


>ref|XP_002511611.1| conserved hypothetical protein [Ricinus communis]
           gi|223548791|gb|EEF50280.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 561

 Score =  195 bits (495), Expect = 1e-47
 Identities = 92/170 (54%), Positives = 124/170 (72%)
 Frame = +1

Query: 13  RSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLGRGVAFSRLSKMIK 192
           R+  H ++KLDF+H IGFGEN +T+KVL++LHG+ SELQ RF+ LL  G+ FS+L  MI+
Sbjct: 388 RTPTHTMSKLDFVHGIGFGENALTVKVLTHLHGSSSELQERFDCLLRLGIGFSKLCTMIR 447

Query: 193 MLPKVLNQKPELLKDKVDFLCNEVGMSVQFLNVFPGFLCFDLENRMKPRLRIHKWILENG 372
            +PK+LNQ+ E+L+ KV+FLC E+G S+Q L +FP FLCF+LENR+KPR R H W+ E G
Sbjct: 448 TMPKILNQQSEILEQKVNFLCQEMGSSLQELYIFPAFLCFNLENRIKPRYRFHMWLTEKG 507

Query: 373 FHAKEYSLASIIATSENRFIDRLVGIHPTVLKQWFERFSSKNHFYSPQEP 522
              + YS++SI+ATSE  F+ RL GIHP V K WFE       F  P++P
Sbjct: 508 VSTQTYSISSIVATSEKNFVARLYGIHPAVPKHWFE-------FLMPKKP 550